RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 CIDECQ96AQ7 238 aaPredicted RBP24.12■■□□□ 1.45
NME3-208ENST00000565379 CTHRC1Q96CG8 243 aa24.12■■□□□ 1.45
NME3-208ENST00000565379 TEX37Q96LM6 180 aa24.12■■□□□ 1.45
NME3-208ENST00000565379 CNPPD1Q9BV87 410 aa24.12■■□□□ 1.45
NME3-208ENST00000565379 NEUROD4Q9HD90 331 aa24.12■■□□□ 1.45
NME3-208ENST00000565379 RYDENQ9NUL5 291 aaKnown RBP24.12■■□□□ 1.45
NME3-208ENST00000565379 MAT2BQ9NZL9 334 aa24.12■■□□□ 1.45
NME3-208ENST00000565379 USP9YO00507 2555 aaPredicted RBP24.12■■□□□ 1.45
NME3-208ENST00000565379 SPTAN1Q13813 2472 aaKnown RBP24.11■■□□□ 1.45
NME3-208ENST00000565379 DOCK10Q96BY6 2186 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 A0A087WV62 115 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 PRSS51A0A1B0GVH4 220 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 PLOD2O00469 737 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 SLC22A2O15244 555 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 PGRP06401 933 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 IL12AP29459 219 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 DUSP2Q05923 314 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 SF3A3Q12874 501 aaKnown RBP eCLIP24.11■■□□□ 1.45
NME3-208ENST00000565379 ZNF628Q5EBL2 1059 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 SPANXN4Q5MJ08 99 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 DGAT2L6Q6ZPD8 337 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 APCDD1LQ8NCL9 501 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 OR9A2Q8NGT5 310 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 ELP5Q8TE02 316 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 ZNF721Q8TF20 911 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 SMAD5Q99717 465 aaKnown RBP24.11■■□□□ 1.45
NME3-208ENST00000565379 OR8D2Q9GZM6 311 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 LHPPQ9H008 270 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 ZBTB20Q9HC78 741 aaPredicted RBP24.11■■□□□ 1.45
NME3-208ENST00000565379 SLAMF7Q9NQ25 335 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 PTGFRNQ9P2B2 879 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 ZNF639Q9UID6 485 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 PCDHGB4Q9UN71 923 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 CFL2Q9Y281 166 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 CNTRLQ7Z7A1 2325 aa24.11■■□□□ 1.45
NME3-208ENST00000565379 OR6C76A6NM76 312 aa24.1■■□□□ 1.45
NME3-208ENST00000565379 PLOD3O60568 738 aa24.1■■□□□ 1.45
NME3-208ENST00000565379 IGKV3-11P04433 115 aa24.1■■□□□ 1.45
NME3-208ENST00000565379 GPC1P35052 558 aa24.1■■□□□ 1.45
NME3-208ENST00000565379 KCNK10P57789 538 aa24.1■■□□□ 1.45
NME3-208ENST00000565379 MGAT2Q10469 447 aa24.1■■□□□ 1.45
NME3-208ENST00000565379 SLC6A19Q695T7 634 aa24.1■■□□□ 1.45
NME3-208ENST00000565379 GALNT16Q8N428 558 aa24.1■■□□□ 1.45
NME3-208ENST00000565379 TSPEARQ8WU66 669 aa24.1■■□□□ 1.45
NME3-208ENST00000565379 NCLNQ969V3 563 aa24.1■■□□□ 1.45
NME3-208ENST00000565379 BTNL2Q9UIR0 455 aa24.1■■□□□ 1.45
NME3-208ENST00000565379 ERVK-19Q9WJR5 959 aa24.1■■□□□ 1.45
NME3-208ENST00000565379 ARL2BPQ9Y2Y0 163 aa24.1■■□□□ 1.45
NME3-208ENST00000565379 UTP20O75691 2785 aaKnown RBP24.1■■□□□ 1.45
NME3-208ENST00000565379 ITGA3P26006 1051 aa24.09■■□□□ 1.45
NME3-208ENST00000565379 RCAN2Q14206 197 aa24.09■■□□□ 1.45
NME3-208ENST00000565379 GKAP1Q5VSY0 366 aaPredicted RBP24.09■■□□□ 1.45
NME3-208ENST00000565379 OR4F3Q6IEY1 312 aa24.09■■□□□ 1.45
NME3-208ENST00000565379 BLOC1S3Q6QNY0 202 aa24.09■■□□□ 1.45
NME3-208ENST00000565379 HSDL2Q6YN16 418 aa24.09■■□□□ 1.45
NME3-208ENST00000565379 RNF111Q6ZNA4 994 aa24.09■■□□□ 1.45
NME3-208ENST00000565379 AMER2Q8N7J2 671 aa24.09■■□□□ 1.45
NME3-208ENST00000565379 PSMA8Q8TAA3 256 aa24.09■■□□□ 1.45
NME3-208ENST00000565379 CPT1CQ8TCG5 803 aa24.09■■□□□ 1.45
NME3-208ENST00000565379 THOC3Q96J01 351 aaKnown RBP24.09■■□□□ 1.45
NME3-208ENST00000565379 OR52E6Q96RD3 313 aa24.09■■□□□ 1.45
NME3-208ENST00000565379 ZNF552Q9H707 407 aaPredicted RBP24.09■■□□□ 1.45
NME3-208ENST00000565379 RMND5AQ9H871 391 aa24.09■■□□□ 1.45
NME3-208ENST00000565379 SAR1AQ9NR31 198 aa24.09■■□□□ 1.45
NME3-208ENST00000565379 CCDC167Q9P0B6 97 aa24.09■■□□□ 1.45
NME3-208ENST00000565379 CROCCQ5TZA2 2017 aa24.08■■□□□ 1.45
NME3-208ENST00000565379 CFLARO15519 480 aa24.08■■□□□ 1.45
NME3-208ENST00000565379 CT62P0C5K7 136 aa24.08■■□□□ 1.45
NME3-208ENST00000565379 WNT3P56703 355 aa24.08■■□□□ 1.45
NME3-208ENST00000565379 Q0VFX4 171 aa24.08■■□□□ 1.45
NME3-208ENST00000565379 HSPB3Q12988 150 aa24.08■■□□□ 1.45
NME3-208ENST00000565379 MYBPC3Q14896 1274 aa24.08■■□□□ 1.45
NME3-208ENST00000565379 LTB4RQ15722 352 aa24.08■■□□□ 1.45
NME3-208ENST00000565379 AGKQ53H12 422 aa24.08■■□□□ 1.45
NME3-208ENST00000565379 ZNF551Q7Z340 670 aaPredicted RBP24.08■■□□□ 1.45
NME3-208ENST00000565379 ADCY4Q8NFM4 1077 aa24.08■■□□□ 1.45
NME3-208ENST00000565379 OR5L2Q8NGL0 311 aa24.08■■□□□ 1.45
NME3-208ENST00000565379 OR9I1Q8NGQ6 314 aa24.08■■□□□ 1.45
NME3-208ENST00000565379 ELP4Q96EB1 424 aa24.08■■□□□ 1.45
NME3-208ENST00000565379 PSMG3-AS1Q96PY0 264 aa24.08■■□□□ 1.45
NME3-208ENST00000565379 C3orf14Q9HBI5 128 aa24.08■■□□□ 1.45
NME3-208ENST00000565379 PRODH2Q9UF12 536 aa24.08■■□□□ 1.45
NME3-208ENST00000565379 CDK2AP1O14519 115 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 DPM1O60762 260 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 PRAMEF2O60811 474 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 SCN2BO60939 215 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 COQ9O75208 318 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 ZFAND5O76080 213 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 S1PR1P21453 382 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 ZFP36L2P47974 494 aaKnown RBP24.07■■□□□ 1.44
NME3-208ENST00000565379 FAM111BQ6SJ93 734 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 TMEM64Q6YI46 380 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 LGI4Q8N135 537 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 OR2L13Q8N349 312 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 SLC5A8Q8N695 610 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 ANKS4BQ8N8V4 417 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 NUDT8Q8WV74 236 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 MOAP1Q96BY2 351 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 CCDC115Q96NT0 180 aa24.07■■□□□ 1.44
NME3-208ENST00000565379 DEFB126Q9BYW3 111 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms