RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 ZFR2Q9UPR6 939 aaKnown RBP19.39■□□□□ 0.69
MAP1LC3B-206ENST00000564844 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 EEF1E1O43324 174 aaKnown RBP19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PDGFAP04085 211 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 BUD31P41223 144 aaPredicted RBP19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 BNC1Q01954 994 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 GPR176Q14439 515 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 DEFB128Q7Z7B8 93 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 AP3S1Q92572 193 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ATF6BQ99941 703 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TMEM43Q9BTV4 400 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CWH43Q9H720 699 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 DSPPQ9NZW4 1301 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 GLOD5A6NK44 160 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 FAM183AA6NL82 134 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CLDN20P56880 219 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 RPL6Q02878 288 aaKnown RBP19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 KLHL22Q53GT1 634 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CREB3L2Q70SY1 520 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ZNF480Q8WV37 535 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 MS4A3Q96HJ5 214 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 FNDC11Q9BVV2 318 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 NCKAP1Q9Y2A7 1128 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TRPM7Q96QT4 1865 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 HRGP04196 525 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SERPIND1P05546 499 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 EVX1P49640 407 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 C12orf73Q69YU5 71 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SLCO4C1Q6ZQN7 724 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 KLBQ86Z14 1044 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 FAM181AQ8N9Y4 354 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SCLYQ96I15 445 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TMEM38AQ9H6F2 299 aa19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 GPBP1L1Q9HC44 474 aaPredicted RBP19.38■□□□□ 0.69
MAP1LC3B-206ENST00000564844 A0A1W2PPK0 400 aa19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 OR7A10O76100 309 aa19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TEKQ02763 1124 aa19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SLC30A6Q6NXT4 461 aa19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ZNF767PQ75MW2 155 aa19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ZNF680Q8NEM1 530 aa19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.37■□□□□ 0.693e-6■■■□□ 14.9
MAP1LC3B-206ENST00000564844 NIPAL2Q9H841 368 aa19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 MGAT4BQ9UQ53 548 aa19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SCN10AQ9Y5Y9 1956 aa19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 NUPL2O15504 423 aaKnown RBP19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 KLHL18O94889 574 aa19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CCT3P49368 545 aaKnown RBP19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ZSWIM7Q19AV6 140 aa19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CFAP206Q8IYR0 622 aa19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CEP76Q8TAP6 659 aa19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SMAP2Q8WU79 429 aaPredicted RBP19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SORCS1Q8WY21 1168 aa19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 DIMT1Q9UNQ2 313 aaKnown RBP19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SF3B6Q9Y3B4 125 aaKnown RBP19.37■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ZC3H12DA2A288 527 aaKnown RBP19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 AGAP14A8MT82 685 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 B4GALT2O60909 372 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SLC22A5O76082 557 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 EOMESO95936 686 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CATP04040 527 aaKnown RBP19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TP53P04637 393 aaPredicted RBP19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TFPIP10646 304 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PEPDP12955 493 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SOX9P48436 509 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 RNF144AP50876 292 aaPredicted RBP19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ZNF81P51508 661 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PPP3R1P63098 170 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ZBTB37Q5TC79 503 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 RAET1GQ6H3X3 334 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 FBXL6Q8N531 539 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 BBS1Q8NFJ9 593 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ALDH1A1P00352 501 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 LIMS3P0CW19 117 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 LIMS4P0CW20 117 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ZNF30P17039 623 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PTGS2P35354 604 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 MTNR1AP48039 350 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TMEM220Q6QAJ8 160 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 RAET1EQ8TD07 263 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 GTPBP2Q9BX10 602 aaKnown RBP19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TTTY10Q9BZA0 68 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SLC7A5P2Q9GIP4 190 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 C12orf4Q9NQ89 552 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 POLHQ9Y253 713 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 Q9Y3F1 56 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CDH10Q9Y6N8 788 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 GABRPO00591 440 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SLC2A10O95528 541 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 SLC6A11P48066 632 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 C6orf120Q7Z4R8 191 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 LRRTM4Q86VH4 590 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 CBARPQ8N350 705 aaPredicted RBP19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 LRRC17Q8N6Y2 441 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 ZNF655Q8N720 491 aaPredicted RBP19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 OR11H7Q8NGC8 314 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 MARVELD1Q9BSK0 173 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 MRPL15Q9P015 296 aaKnown RBP19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 PTGFRNQ9P2B2 879 aa19.36■□□□□ 0.69
MAP1LC3B-206ENST00000564844 GON4LQ3T8J9 2241 aa19.35■□□□□ 0.69
MAP1LC3B-206ENST00000564844 TMEM189-UBE2V1I3L0A0 370 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms