RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 C16orf52Q8NHV5 167 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 OR5P2Q8WZ92 322 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 ART5Q96L15 291 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 OR10A5Q9H207 317 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 CXorf36Q9H7Y0 433 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 LIN28AQ9H9Z2 209 aaKnown RBP11.58□□□□□ -0.56
KARS-204ENST00000564578 ZBTB20Q9HC78 741 aaPredicted RBP11.58□□□□□ -0.56
KARS-204ENST00000564578 SERHLQ9NQF3 203 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 NTMQ9P121 344 aa11.58□□□□□ -0.56
KARS-204ENST00000564578 ASPDHA6ND91 283 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 A8MUI8 341 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 K7EM74 188 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 FAM87AP0C7U9 286 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 CAPN3P20807 821 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 EBPQ15125 230 aaKnown RBP11.57□□□□□ -0.56
KARS-204ENST00000564578 TIGD2Q4W5G0 525 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 AGKQ53H12 422 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 PCSK4Q6UW60 755 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 OR7G1Q8NGA0 311 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 OR52R1Q8NGF1 315 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 OR8K3Q8NH51 312 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 THAP3Q8WTV1 239 aaPredicted RBP11.57□□□□□ -0.56
KARS-204ENST00000564578 ERP27Q96DN0 273 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 OR52E6Q96RD3 313 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 ZBTB18Q99592 522 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 TMEM45AQ9NWC5 275 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 FAM120CQ9NX05 1096 aaKnown RBP11.57□□□□□ -0.56
KARS-204ENST00000564578 GPR83Q9NYM4 423 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 TAS2R9Q9NYW1 312 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 PTGFRNQ9P2B2 879 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 COPS7AQ9UBW8 275 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 C19orf53Q9UNZ5 99 aaPredicted RBP11.57□□□□□ -0.56
KARS-204ENST00000564578 SPTA1P02549 2419 aa11.57□□□□□ -0.56
KARS-204ENST00000564578 ZNF354AO60765 605 aaPredicted RBP11.56□□□□□ -0.56
KARS-204ENST00000564578 SLITRK5O94991 958 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 IFI6P09912 130 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 SOX11P35716 441 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 VPS26BQ4G0F5 336 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 ANXA8L1Q5VT79 327 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 TCTN3Q6NUS6 607 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 RNF111Q6ZNA4 994 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 ZFP28Q8NHY6 868 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 ADIPOR1Q96A54 375 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 ABHD17AQ96GS6 310 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 CCDC115Q96NT0 180 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 SMAD5Q99717 465 aaKnown RBP11.56□□□□□ -0.56
KARS-204ENST00000564578 INPP5KQ9BT40 448 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 DEFB126Q9BYW3 111 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 SLC6A13Q9NSD5 602 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 ARMCX1Q9P291 453 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 MYOTQ9UBF9 498 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 PCDHGA9Q9Y5G4 932 aaKnown RBP11.56□□□□□ -0.56
KARS-204ENST00000564578 PRRC2CQ9Y520 2896 aaKnown RBP11.56□□□□□ -0.56
KARS-204ENST00000564578 CHD6Q8TD26 2715 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 ZFAND5O76080 213 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 C1QCP02747 245 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 PDGFAP04085 211 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 ABCB1P08183 1280 aaPredicted RBP11.56□□□□□ -0.56
KARS-204ENST00000564578 GPC1P35052 558 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 CDKN2CP42773 168 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 ST13P50502 369 aaKnown RBP11.56□□□□□ -0.56
KARS-204ENST00000564578 AP2B1P63010 937 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 TLR1Q15399 786 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 ACER2Q5QJU3 275 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 MTDHQ86UE4 582 aaKnown RBP11.56□□□□□ -0.56
KARS-204ENST00000564578 CLEC4FQ8N1N0 589 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 ZNF441Q8N8Z8 693 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 EXD3Q8N9H8 876 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 VPS37AQ8NEZ2 397 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 GOT1L1Q8NHS2 421 aaPredicted RBP11.56□□□□□ -0.56
KARS-204ENST00000564578 GTF2H4Q92759 462 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 SPDL1Q96EA4 605 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 FAM120BQ96EK7 910 aaKnown RBP11.56□□□□□ -0.56
KARS-204ENST00000564578 MAGED4Q96JG8 741 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 VSTM2LQ96N03 204 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 WWTR1Q9GZV5 400 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 NEUROD4Q9HD90 331 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 DDX18Q9NVP1 670 aaKnown RBP11.56□□□□□ -0.56
KARS-204ENST00000564578 BCAP29Q9UHQ4 241 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 BTNL2Q9UIR0 455 aa11.56□□□□□ -0.56
KARS-204ENST00000564578 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 OR6C76A6NM76 312 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 FCHO1O14526 889 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 PRAMEF2O60811 474 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 PTPN6P29350 595 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 RHDQ02161 417 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 KLF10Q13118 480 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 CRB2Q5IJ48 1285 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 C6orf163Q5TEZ5 329 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 AGAP7PQ5VUJ5 663 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 IGFL2Q6UWQ7 119 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 GK5Q6ZS86 529 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 RPS19BP1Q86WX3 136 aaKnown RBP11.55□□□□□ -0.56
KARS-204ENST00000564578 SLC5A8Q8N695 610 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 NUBPLQ8TB37 319 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 GIMAP5Q96F15 307 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 AGAP4Q96P64 663 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 SLC25A23Q9BV35 468 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 MYLK2Q9H1R3 596 aa11.55□□□□□ -0.56
KARS-204ENST00000564578 CDCP1Q9H5V8 836 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms