RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 IFNEQ86WN2 208 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 TMEM151BQ8IW70 566 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 SHISA5Q8N114 240 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 CDRT4Q8N9R6 151 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 MORN4Q8NDC4 146 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 OR52R1Q8NGF1 315 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 OR10A6Q8NH74 314 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 PPWD1Q96BP3 646 aaKnown RBP11.97□□□□□ -0.49
CLK3-214ENST00000564096 CTHRC1Q96CG8 243 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 LPAR4Q99677 370 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 ACTRT3Q9BYD9 372 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 TRIM8Q9BZR9 551 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 TRIM4Q9C037 500 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 IKZF5Q9H5V7 419 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 EQTNQ9NQ60 294 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 P2RX2Q9UBL9 471 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 MAGEL2Q9UJ55 1249 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 ERVK-19Q9WJR5 959 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 ANGPT4Q9Y264 503 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 PCDHGB3Q9Y5G1 929 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 AK5Q9Y6K8 562 aa11.97□□□□□ -0.49
CLK3-214ENST00000564096 SCN3AQ9NY46 2000 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 MYOCOSA0A1B0GUC4 107 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 ELOVL7A1L3X0 281 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 OR2W5A6NFC9 320 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 SAGE2PA6NJ88 616 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 CNOT3O75175 753 aaKnown RBP11.96□□□□□ -0.49
CLK3-214ENST00000564096 PSMG1O95456 288 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 HMGN2P05204 90 aaKnown RBP11.96□□□□□ -0.49
CLK3-214ENST00000564096 LIPCP11150 499 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 TCN1P20061 433 aaPredicted RBP11.96□□□□□ -0.49
CLK3-214ENST00000564096 MATN1P21941 496 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 HTR1EP28566 365 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 PTGER1P34995 402 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 DLSTP36957 453 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 RBBP4Q09028 425 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 FUT7Q11130 342 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 FOXC1Q12948 553 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 ZNF630Q2M218 657 aaPredicted RBP11.96□□□□□ -0.49
CLK3-214ENST00000564096 SFT2D3Q587I9 215 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 ATAD3BQ5T9A4 648 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 FHL5Q5TD97 284 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 FAAH2Q6GMR7 532 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 MFSD12Q6NUT3 480 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 TNFAIP8L2Q6P589 184 aaPredicted RBP11.96□□□□□ -0.49
CLK3-214ENST00000564096 TMEM205Q6UW68 189 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 RNF111Q6ZNA4 994 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 LANCL3Q6ZV70 420 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 TIPARPQ7Z3E1 657 aaKnown RBP11.96□□□□□ -0.49
CLK3-214ENST00000564096 CPEB2Q7Z5Q1 589 aaKnown RBP11.96□□□□□ -0.49
CLK3-214ENST00000564096 NET1Q7Z628 596 aaPredicted RBP11.96□□□□□ -0.49
CLK3-214ENST00000564096 LAPTM4BQ86VI4 370 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 RAB43Q86YS6 212 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 HPS6Q86YV9 775 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 LGI4Q8N135 537 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 CLEC4FQ8N1N0 589 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 IL22RA1Q8N6P7 574 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 RNF148Q8N7C7 305 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 C11orf65Q8NCR3 313 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 MIPOL1Q8TD10 442 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 NCLNQ969V3 563 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 NACC2Q96BF6 587 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 CLPTM1LQ96KA5 538 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 LRGUKQ96M69 825 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 EFHD1Q9BUP0 239 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 SPRY4Q9C004 299 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 OR8D2Q9GZM6 311 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 EPS8L2Q9H6S3 715 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 GPATCH2Q9NW75 528 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 SLC7A8Q9UHI5 535 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 TCFL5Q9UL49 500 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 SNX13Q9Y5W8 968 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 ZNF292O60281 2723 aa11.96□□□□□ -0.49
CLK3-214ENST00000564096 PCNX2A6NKB5 2137 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 OR6C76A6NM76 312 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 C5orf58C9J3I9 102 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 ANKRD65E5RJM6 399 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 KLF7O75840 302 aaPredicted RBP11.95□□□□□ -0.5
CLK3-214ENST00000564096 CBX7O95931 251 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 AK1P00568 194 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 ALOX5P09917 674 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 CT62P0C5K7 136 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 BMP2P12643 396 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 ETFAP13804 333 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 MMP11P24347 488 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 PCGF2P35227 344 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 RPS26P62854 115 aaKnown RBP11.95□□□□□ -0.5
CLK3-214ENST00000564096 PSPHP78330 225 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 MGAT2Q10469 447 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 FLOT2Q14254 428 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 RTP5Q14D33 572 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 TRMT12Q53H54 448 aaKnown RBP11.95□□□□□ -0.5
CLK3-214ENST00000564096 INTS11Q5TA45 600 aaKnown RBP11.95□□□□□ -0.5
CLK3-214ENST00000564096 CDC73Q6P1J9 531 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 PGM2L1Q6PCE3 622 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 PAPD4Q6PIY7 484 aaKnown RBP11.95□□□□□ -0.5
CLK3-214ENST00000564096 MICU2Q8IYU8 434 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 METTL25Q8N6Q8 603 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 SLC2A12Q8TD20 617 aa11.95□□□□□ -0.5
CLK3-214ENST00000564096 ADAMTS15Q8TE58 950 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms