RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 KCNJ16Q9NPI9 418 aa16.23■□□□□ 0.19
NME3-205ENST00000563854 MAT2BQ9NZL9 334 aa16.23■□□□□ 0.19
NME3-205ENST00000563854 UTS2RQ9UKP6 389 aa16.23■□□□□ 0.19
NME3-205ENST00000563854 CES1P1Q9UKY3 287 aa16.23■□□□□ 0.19
NME3-205ENST00000563854 PSME2Q9UL46 239 aa16.23■□□□□ 0.19
NME3-205ENST00000563854 FAM215AQ9Y5M1 114 aa16.23■□□□□ 0.19
NME3-205ENST00000563854 NCKAP5O14513 1909 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 C15orf38-AP3S2A0A0A6YYH1 394 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 FOXO6A8MYZ6 492 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 ULK1O75385 1050 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 ATP1B1P05026 303 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 IL3P08700 152 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 GLI4P10075 376 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 HSD3B1P14060 373 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 HSD3B2P26439 372 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 SSTR2P30874 369 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 PRKAA2P54646 552 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 RPP38P78345 283 aaKnown RBP16.22■□□□□ 0.19
NME3-205ENST00000563854 HMGCS1Q01581 520 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 BTKQ06187 659 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 LCP2Q13094 533 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 TBCELQ5QJ74 424 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 SIMC1Q8NDZ2 872 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 OR52R1Q8NGF1 315 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 LILRB4Q8NHJ6 448 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 CDC26Q8NHZ8 85 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 ACMSDQ8TDX5 336 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 EXOSC8Q96B26 276 aaKnown RBP16.22■□□□□ 0.19
NME3-205ENST00000563854 SPOCK3Q9BQ16 436 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 EBPLQ9BY08 206 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 TXLNGYQ9BZA5 131 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 METTL7AQ9H8H3 244 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 EHD3Q9NZN3 535 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 MCM8Q9UJA3 840 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 DLGAP4Q9Y2H0 992 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 STK38LQ9Y2H1 464 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 TIMM22Q9Y584 194 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 PKDREJQ9NTG1 2253 aa16.22■□□□□ 0.19
NME3-205ENST00000563854 DNAJC13O75165 2243 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 A0A1W2PPM1 405 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 GNB5O14775 395 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 WDR1O75083 606 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 TRIM3O75382 744 aaPredicted RBP16.21■□□□□ 0.19
NME3-205ENST00000563854 GSTA1P08263 222 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 PCSK2P16519 638 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 S1PR1P21453 382 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 ABCD3P28288 659 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 SLCO1A2P46721 670 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 TRA2BP62995 288 aaKnown RBP16.21■□□□□ 0.19
NME3-205ENST00000563854 MRPS35P82673 323 aaKnown RBP16.21■□□□□ 0.19
NME3-205ENST00000563854 TLE4Q04727 773 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 ACSM2AQ08AH3 577 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 PLCXD2Q0VAA5 305 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 DUSP8Q13202 625 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 ACSM2BQ68CK6 577 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 RTL6Q6ICC9 239 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 PACS2Q86VP3 889 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 NEIL3Q8TAT5 605 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 UBLCP1Q8WVY7 318 aaPredicted RBP16.21■□□□□ 0.19
NME3-205ENST00000563854 L3HYPDHQ96EM0 354 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 CNRIP1Q96F85 164 aaPredicted RBP16.21■□□□□ 0.19
NME3-205ENST00000563854 APIPQ96GX9 242 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 ENKD1Q9H0I2 346 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 EPB41L4BQ9H329 900 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 MID1IP1Q9NPA3 183 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 NPDC1Q9NQX5 325 aaPredicted RBP16.21■□□□□ 0.19
NME3-205ENST00000563854 HEY2Q9UBP5 337 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 CFL2Q9Y281 166 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 PLLPQ9Y342 182 aa16.21■□□□□ 0.19
NME3-205ENST00000563854 A0A0G2JNJ9 132 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 GLRA3O75311 464 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 ENO1P06733 434 aaKnown RBP16.2■□□□□ 0.18
NME3-205ENST00000563854 MYL2P10916 166 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 PKNOX1P55347 436 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 MGAT2Q10469 447 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 MAP4K2Q12851 820 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 TRMT12Q53H54 448 aaKnown RBP16.2■□□□□ 0.18
NME3-205ENST00000563854 SPIN4Q56A73 249 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 SPDYAQ5MJ70 313 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 DESI1Q6ICB0 168 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 GBP7Q8N8V2 638 aaPredicted RBP16.2■□□□□ 0.18
NME3-205ENST00000563854 CCDC63Q8NA47 563 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 MZB1Q8WU39 189 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 OMA1Q96E52 524 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 GNRHR2Q96P88 292 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 GSTO2Q9H4Y5 243 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 ACKR4Q9NPB9 350 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 RYDENQ9NUL5 291 aaKnown RBP16.2■□□□□ 0.18
NME3-205ENST00000563854 QPCTLQ9NXS2 382 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 Q9UFV3 132 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 FETUBQ9UGM5 382 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 DCDC2Q9UHG0 476 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 ITGB1BP2Q9UKP3 347 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 ADGRG4Q8IZF6 3080 aa16.2■□□□□ 0.18
NME3-205ENST00000563854 PHF3Q92576 2039 aaKnown RBP16.19■□□□□ 0.18
NME3-205ENST00000563854 DCHS2Q6V1P9 2916 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 CCDC151A5D8V7 595 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 ANKRD33BA6NCL7 494 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 CRCPO75575 148 aa16.19■□□□□ 0.18
NME3-205ENST00000563854 PPM1BO75688 479 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms