RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 RPS27LQ71UM5 84 aaKnown RBP15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 PACS2Q86VP3 889 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 CTAGE4Q8IX94 777 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 VWA5B2Q8N398 1253 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 LIX1Q8N485 282 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 MTBPQ96DY7 904 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 ZNF681Q96N22 645 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 RILPQ96NA2 401 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 MAT2BQ9NZL9 334 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 FETUBQ9UGM5 382 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 PSME2Q9UL46 239 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 C15orf41Q9Y2V0 281 aa15.77■□□□□ 0.12
VPS9D1-203ENST00000563798 CELSR1Q9NYQ6 3014 aa15.77■□□□□ 0.11
VPS9D1-203ENST00000563798 NCKAP5O14513 1909 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 INTS1Q8N201 2190 aaKnown RBP15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 HSPB2A8KAH6 182 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 LRATO95237 230 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 EPPINO95925 133 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 ABCB1P08183 1280 aaPredicted RBP15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 GDF1P27539 372 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 CEACAM8P31997 349 aaPredicted RBP15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 DLX5P56178 289 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 HSPB2Q16082 182 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 CES4AQ5XG92 561 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 VASNQ6EMK4 673 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 CNPY4Q8N129 248 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 HSPBAP1Q96EW2 488 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 JSRP1Q96MG2 331 aaPredicted RBP15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 ZNF382Q96SR6 550 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 TIMP4Q99727 224 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 ZNF559Q9BR84 538 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 FAIM2Q9BWQ8 316 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 PRDM14Q9GZV8 571 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 NXF5Q9H1B4 397 aaKnown RBP15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 VPS29Q9UBQ0 182 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 DTX4Q9Y2E6 619 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 L3MBTL1Q9Y468 752 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 F8P00451 2351 aa15.76■□□□□ 0.11
VPS9D1-203ENST00000563798 HIVEP1P15822 2718 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 EXOC1LA0A1B0GW35 172 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 MANBAO00462 879 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 ACOX3O15254 700 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 PPM1BO75688 479 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 OR4F21O95013 312 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 TAC1P20366 129 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 DRD5P21918 477 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 TIMP3P35625 211 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 DEKP35659 375 aaKnown RBP15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 PEX19P40855 299 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 TRPC1P48995 793 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 DCAF7P61962 342 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 CSTF3Q12996 717 aaKnown RBP15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 RASA2Q15283 850 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 UNC50Q53HI1 259 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 ZNF678Q5SXM1 525 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 BICRALQ6AI39 1079 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 TIGD3Q6B0B8 471 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 FAM111BQ6SJ93 734 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 TRMT10CQ7L0Y3 403 aaKnown RBP15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 NUP54Q7Z3B4 507 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 C1orf52Q8N6N3 182 aaKnown RBP15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 UHMK1Q8TAS1 419 aaKnown RBP15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 HGDQ93099 445 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 ERP27Q96DN0 273 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 CNRIP1Q96F85 164 aaPredicted RBP15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 LCORQ96JN0 433 aaPredicted RBP15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 ALKBH4Q9NXW9 302 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 TMEM216Q9P0N5 145 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 MCM8Q9UJA3 840 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 NINQ8N4C6 2090 aa15.75■□□□□ 0.11
VPS9D1-203ENST00000563798 SYT5O00445 386 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 TO15178 435 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 DLX3O60479 287 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 CBX7O95931 251 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 KRT6AP02538 564 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 KRT6BP04259 564 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 RHOXF2BP0C7M4 288 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 DRD2P14416 443 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 TSPAN8P19075 237 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 IMPDH1P20839 514 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 PTPN6P29350 595 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 FEN1P39748 380 aaKnown RBP15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 PPICP45877 212 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 KRT6CP48668 564 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 DUSP2Q05923 314 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 SNTA1Q13424 505 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 SF3B4Q15427 424 aaKnown RBP eCLIP15.74■□□□□ 0.112e-8■■■■■ 28
VPS9D1-203ENST00000563798 FBXL19-AS1Q494R0 122 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 ACSF3Q4G176 576 aaPredicted RBP15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 SLC30A6Q6NXT4 461 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 POMZP3Q6PJE2 187 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 LACC1Q8IV20 430 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 PM20D2Q8IYS1 436 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 MMP21Q8N119 569 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 GBP7Q8N8V2 638 aaPredicted RBP15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 ZNF675Q8TD23 568 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 KLHL29Q96CT2 875 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 C11orf24Q96F05 449 aaPredicted RBP15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 GNRHR2Q96P88 292 aa15.74■□□□□ 0.11
VPS9D1-203ENST00000563798 ZNF629Q9UEG4 869 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms