RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 CPA2P48052 419 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 SRYQ05066 204 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 PLCXD2Q0VAA5 305 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 FUT7Q11130 342 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 DAZAP2Q15038 168 aaPredicted RBP11.86□□□□□ -0.51
SF3B3-202ENST00000562722 SGO1Q5FBB7 561 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 DCST1Q5T197 706 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 CCNYL2Q5T2Q4 361 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 FNDC7Q5VTL7 733 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 TIGD3Q6B0B8 471 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 PAGE2Q7Z2X7 111 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 VWA5B2Q8N398 1253 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 ZNF615Q8N8J6 731 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 PTGR2Q8N8N7 351 aaPredicted RBP11.86□□□□□ -0.51
SF3B3-202ENST00000562722 L3MBTL4Q8NA19 623 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 FAM83FQ8NEG4 500 aaPredicted RBP11.86□□□□□ -0.51
SF3B3-202ENST00000562722 OR7G1Q8NGA0 311 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 WDR20Q8TBZ3 569 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 FBXO25Q8TCJ0 367 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 ADIPOR1Q96A54 375 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 WDYHV1Q96HA8 205 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 TMEM41AQ96HV5 264 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 RAB17Q9H0T7 212 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 NXF5Q9H1B4 397 aaKnown RBP11.86□□□□□ -0.51
SF3B3-202ENST00000562722 GRPEL1Q9HAV7 217 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 PSD3Q9NYI0 1048 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 AHSPQ9NZD4 102 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 KLRF1Q9NZS2 232 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 MAPRE3Q9UPY8 281 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 IKBKGQ9Y6K9 419 aa11.86□□□□□ -0.51
SF3B3-202ENST00000562722 ZNF469Q96JG9 3925 aaPredicted RBP11.86□□□□□ -0.51
SF3B3-202ENST00000562722 CCDC189A1A4V9 331 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 C2orf72A6NCS6 295 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 MBD3L4A6NDZ8 208 aaPredicted RBP11.85□□□□□ -0.51
SF3B3-202ENST00000562722 MBD3L3A6NE82 208 aaPredicted RBP11.85□□□□□ -0.51
SF3B3-202ENST00000562722 GOLGA6L10A6NI86 522 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 MBD3L5A6NJ08 208 aaPredicted RBP11.85□□□□□ -0.51
SF3B3-202ENST00000562722 CLCA1A8K7I4 914 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 GUCY1B2O75343 617 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 ERAL1O75616 437 aaKnown RBP11.85□□□□□ -0.51
SF3B3-202ENST00000562722 PPM1BO75688 479 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 KLHL2O95198 593 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 ATE1O95260 518 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 ABCB1P08183 1280 aaPredicted RBP11.85□□□□□ -0.51
SF3B3-202ENST00000562722 GPX3P22352 226 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 PTPN6P29350 595 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 TYK2P29597 1187 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 SERPINB8P50452 374 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 MAPK12P53778 367 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 NAGLUP54802 743 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 ADAM8P78325 824 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 SORDQ00796 357 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 IFT88Q13099 833 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 POU4F3Q15319 338 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 DEFB113Q30KQ7 82 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 NHSL2Q5HYW2 709 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 FRG2Q64ET8 278 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 POMZP3Q6PJE2 187 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 LUZP2Q86TE4 346 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 MMP21Q8N119 569 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 C9orf106Q8NAJ2 232 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 C17orf47Q8NEP4 570 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 OR52B6Q8NGF0 335 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 OR14L1PQ8NHC6 308 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 MBD3L2Q8NHZ7 208 aaPredicted RBP11.85□□□□□ -0.51
SF3B3-202ENST00000562722 RDH11Q8TC12 318 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 MBD6Q96DN6 1003 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 PHF21BQ96EK2 531 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 FRG2BQ96QU4 278 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 RBM24Q9BX46 236 aaKnown RBP11.85□□□□□ -0.51
SF3B3-202ENST00000562722 OSBPL11Q9BXB4 747 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 ITPAQ9BY32 194 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 MRPL1Q9BYD6 325 aaKnown RBP11.85□□□□□ -0.51
SF3B3-202ENST00000562722 ELOVL6Q9H5J4 265 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 CALHM2Q9HA72 323 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 EHD3Q9NZN3 535 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 CFL2Q9Y281 166 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 DTX4Q9Y2E6 619 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 ARHGAP21Q5T5U3 1957 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 ANKHD1Q8IWZ3 2542 aaKnown RBP11.85□□□□□ -0.51
SF3B3-202ENST00000562722 AKAP6Q13023 2319 aa11.85□□□□□ -0.51
SF3B3-202ENST00000562722 OR7A17O14581 309 aa11.84□□□□□ -0.51
SF3B3-202ENST00000562722 ACTL6AO96019 429 aa11.84□□□□□ -0.51
SF3B3-202ENST00000562722 FOSL1P15407 271 aa11.84□□□□□ -0.51
SF3B3-202ENST00000562722 CNTFP26441 200 aa11.84□□□□□ -0.51
SF3B3-202ENST00000562722 FEN1P39748 380 aaKnown RBP11.84□□□□□ -0.51
SF3B3-202ENST00000562722 EXOSC7Q15024 291 aaKnown RBP11.84□□□□□ -0.51
SF3B3-202ENST00000562722 SLC30A6Q6NXT4 461 aa11.84□□□□□ -0.51
SF3B3-202ENST00000562722 WFDC11Q8NEX6 87 aa11.84□□□□□ -0.51
SF3B3-202ENST00000562722 ADCY4Q8NFM4 1077 aa11.84□□□□□ -0.51
SF3B3-202ENST00000562722 OMA1Q96E52 524 aa11.84□□□□□ -0.51
SF3B3-202ENST00000562722 GALNT9Q9HCQ5 603 aa11.84□□□□□ -0.51
SF3B3-202ENST00000562722 NEUROD4Q9HD90 331 aa11.84□□□□□ -0.51
SF3B3-202ENST00000562722 SERHLQ9NQF3 203 aa11.84□□□□□ -0.51
SF3B3-202ENST00000562722 PFDN4Q9NQP4 134 aa11.84□□□□□ -0.51
SF3B3-202ENST00000562722 ADAM29Q9UKF5 820 aa11.84□□□□□ -0.51
SF3B3-202ENST00000562722 SLC12A4Q9UP95 1085 aa11.84□□□□□ -0.51
SF3B3-202ENST00000562722 ABCA4P78363 2273 aa11.84□□□□□ -0.51
SF3B3-202ENST00000562722 NINQ8N4C6 2090 aa11.83□□□□□ -0.51
SF3B3-202ENST00000562722 C1orf226A1L170 272 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms