RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 KIAA0040Q15053 153 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 ZNF791Q3KP31 576 aaPredicted RBP14.88□□□□□ -0.03
COMMD4-206ENST00000562610 C4orf17Q53FE4 359 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 TRMT12Q53H54 448 aaKnown RBP14.88□□□□□ -0.03
COMMD4-206ENST00000562610 ZNF628Q5EBL2 1059 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 RNFT1Q5M7Z0 435 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 PRAMEF20Q5VT98 475 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 LYPD8Q6UX82 237 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 TMEM64Q6YI46 380 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 SIAH3Q8IW03 269 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 DND1Q8IYX4 353 aaKnown RBP14.88□□□□□ -0.03
COMMD4-206ENST00000562610 PRR22Q8IZ63 422 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 SIMC1Q8NDZ2 872 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 OR52R1Q8NGF1 315 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 CLHC1Q8NHS4 586 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 ZNF675Q8TD23 568 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 TP53INP1Q96A56 240 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 EGLN2Q96KS0 407 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 TSSK3Q96PN8 268 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 CCT7Q99832 543 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 FAM173AQ9BQD7 235 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 GIMAP2Q9UG22 337 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 ZDHHC2Q9UIJ5 367 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 TMED5Q9Y3A6 229 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 USP9XQ93008 2570 aaPredicted RBP14.88□□□□□ -0.03
COMMD4-206ENST00000562610 PTPN13Q12923 2485 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 ZNF407Q9C0G0 2248 aa14.88□□□□□ -0.03
COMMD4-206ENST00000562610 LRRK2Q5S007 2527 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 TRGV8A0A0C4DH27 118 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 ATP6AP2A0A1C7CYW4 349 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 PINLYPA6NC86 204 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 FAM166BA8MTA8 275 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 CAPN14A8MX76 684 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 LRRTM2O43300 516 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 ASNA1O43681 348 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 ITM2AO43736 263 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 CDC40O60508 579 aaKnown RBP eCLIP14.87□□□□□ -0.03
COMMD4-206ENST00000562610 ATP6AP2O75787 350 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 LRATO95237 230 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 RNF224P0DH78 156 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 MPIP34949 423 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 HSF1Q00613 529 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 DUSP8Q13202 625 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 MPP2Q14168 576 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 RPS6KA2Q15349 733 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 UGT3A2Q3SY77 523 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 RFTN2Q52LD8 501 aaPredicted RBP14.87□□□□□ -0.03
COMMD4-206ENST00000562610 KRTCAP3Q53RY4 240 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 XKR7Q5GH72 579 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 HHATQ5VTY9 493 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 CES4AQ5XG92 561 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 SLC22A10Q63ZE4 541 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 FJX1Q86VR8 437 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 GHDCQ8N2G8 530 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 ZFP62Q8NB50 900 aaPredicted RBP14.87□□□□□ -0.03
COMMD4-206ENST00000562610 OR10G3Q8NGC4 313 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 OR6Y1Q8NGX8 325 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.87□□□□□ -0.03
COMMD4-206ENST00000562610 ADIPOR1Q96A54 375 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 CTHRC1Q96CG8 243 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 FCRL1Q96LA6 429 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 PPP3R2Q96LZ3 170 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 NXF5Q9H1B4 397 aaKnown RBP14.87□□□□□ -0.03
COMMD4-206ENST00000562610 ANKRA2Q9H9E1 313 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 PRODH2Q9UF12 536 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 ZNF639Q9UID6 485 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 WBP11Q9Y2W2 641 aaKnown RBP14.87□□□□□ -0.03
COMMD4-206ENST00000562610 NPFFR2Q9Y5X5 522 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 MYO7BQ6PIF6 2116 aa14.87□□□□□ -0.03
COMMD4-206ENST00000562610 DNAJC13O75165 2243 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 TMEM120BA0PK00 339 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 MYO1GB0I1T2 1018 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 TP53I11O14683 189 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 AKAP10O43572 662 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 SLC19A2O60779 497 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 PEX11AO75192 247 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 BCAS2O75934 225 aaPredicted RBP14.86□□□□□ -0.03
COMMD4-206ENST00000562610 STSP08842 583 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 DHRS4L1P0CG22 281 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 ABOP16442 354 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 CNR1P21554 472 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 BGNP21810 368 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 MAPK1P28482 360 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 SOX18P35713 384 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 PIGAP37287 484 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 PER3P56645 1201 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 FBXW4P57775 412 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 ABCE1P61221 599 aaKnown RBP14.86□□□□□ -0.03
COMMD4-206ENST00000562610 KCNJ2P63252 427 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 PLCXD2Q0VAA5 305 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 CASP8Q14790 479 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 CEBPEQ15744 281 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 PDCD2Q16342 344 aaPredicted RBP14.86□□□□□ -0.03
COMMD4-206ENST00000562610 NTRK2Q16620 822 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 PRSS53Q2L4Q9 553 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 ATP6AP1LQ52LC2 224 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 ANKRD26P1Q6NSI1 321 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 FBXW8Q8N3Y1 598 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 C17orf47Q8NEP4 570 aa14.86□□□□□ -0.03
COMMD4-206ENST00000562610 MGARPQ8TDB4 240 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms