RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 PCDHGB4Q9UN71 923 aa6.14□□□□□ -1.43
CAPN3-210ENST00000561817 FAF1Q9UNN5 650 aaPredicted RBP6.14□□□□□ -1.43
CAPN3-210ENST00000561817 SAMD4AQ9UPU9 718 aaKnown RBP6.14□□□□□ -1.43
CAPN3-210ENST00000561817 PCDHGB5Q9Y5G0 923 aa6.14□□□□□ -1.43
CAPN3-210ENST00000561817 MAGED1Q9Y5V3 778 aaPredicted RBP6.14□□□□□ -1.43
CAPN3-210ENST00000561817 SNX5Q9Y5X3 404 aa6.14□□□□□ -1.43
CAPN3-210ENST00000561817 AP4B1Q9Y6B7 739 aa6.14□□□□□ -1.43
CAPN3-210ENST00000561817 U3KQA8 63 aa6.14□□□□□ -1.43
CAPN3-210ENST00000561817 SPTBP11277 2137 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 PI4KAP42356 2102 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 IGHV1OR21-1A0A087WYE8 117 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 IGHV5-51A0A0C4DH38 117 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 FITM1A5D6W6 292 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 TLCD2A6NGC4 264 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 URADA6NGE7 173 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 E9PQ18 207 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 B4GAT1O43505 415 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 FOXS1O43638 330 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 NUDT21O43809 227 aaKnown RBP6.13□□□□□ -1.43
CAPN3-210ENST00000561817 B3GALT2O43825 422 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 PLOD3O60568 738 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 SRPX2O60687 465 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-210ENST00000561817 DEAF1O75398 565 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-210ENST00000561817 GMNNO75496 209 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 IFI6P09912 130 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 CSNK2A2P19784 350 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-210ENST00000561817 CD247P20963 164 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 PTGER1P34995 402 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 SOAT1P35610 550 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 CHI3L1P36222 383 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-210ENST00000561817 DCTP40126 519 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 CRATP43155 626 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 HSPA13P48723 471 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 CCT3P49368 545 aaKnown RBP6.13□□□□□ -1.43
CAPN3-210ENST00000561817 NCBP2P52298 156 aaKnown RBP eCLIP6.13□□□□□ -1.43
CAPN3-210ENST00000561817 IST1P53990 364 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 C21orf59P57076 290 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 VSX2P58304 361 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-210ENST00000561817 DSTNP60981 165 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 RPS26P62854 115 aaKnown RBP6.13□□□□□ -1.43
CAPN3-210ENST00000561817 VLDLRP98155 873 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 PPP2R2BQ00005 443 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 CDK6Q00534 326 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 NHLH1Q02575 133 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 MGAT2Q10469 447 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 FUT5Q11128 374 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 HSPB3Q12988 150 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 BLMHQ13867 455 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 SCARB2Q14108 478 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 GK3PQ14409 553 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 GPR19Q15760 415 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 NRF1Q16656 503 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 LRRC23Q53EV4 343 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-210ENST00000561817 C6orf52Q5T4I8 152 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 FHL5Q5TD97 284 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 LYSMD4Q5XG99 296 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 ANKRD34AQ69YU3 496 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 OR52E8Q6IFG1 317 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 KLHL35Q6PF15 583 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 USP53Q70EK8 1073 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 USP51Q70EK9 711 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 ABHD13Q7L211 337 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 CARM1Q86X55 608 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 ZDHHC21Q8IVQ6 265 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 ARL10Q8N8L6 244 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 OR5T3Q8NGG3 340 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 SLC38A5Q8WUX1 472 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 TMBIM1Q969X1 311 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 RERGQ96A58 199 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-210ENST00000561817 ANKRD9Q96BM1 317 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-210ENST00000561817 ELP4Q96EB1 424 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 TCTN2Q96GX1 697 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 ZC3H10Q96K80 434 aaKnown RBP6.13□□□□□ -1.43
CAPN3-210ENST00000561817 CD180Q99467 661 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 ELF4Q99607 663 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-210ENST00000561817 SLC38A3Q99624 504 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 DOHHQ9BU89 302 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 BDH2Q9BUT1 245 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 C9orf16Q9BUW7 83 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 OSBPL11Q9BXB4 747 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 NPLQ9BXD5 320 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-210ENST00000561817 GABARAPL1Q9H0R8 117 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 YY1AP1Q9H869 796 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 STARD5Q9NSY2 213 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 USE1Q9NZ43 259 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 PHF11Q9UIL8 331 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 RPS6KA6Q9UK32 745 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 ABCG2Q9UNQ0 655 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 NAALAD2Q9Y3Q0 740 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 CLDN16Q9Y5I7 305 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 USP34Q70CQ2 3546 aa6.13□□□□□ -1.43
CAPN3-210ENST00000561817 A0A1B0GTQ1 180 aa6.12□□□□□ -1.43
CAPN3-210ENST00000561817 ZNF860A6NHJ4 632 aa6.12□□□□□ -1.43
CAPN3-210ENST00000561817 A6NHS1 94 aa6.12□□□□□ -1.43
CAPN3-210ENST00000561817 FAM227AF5H4B4 570 aa6.12□□□□□ -1.43
CAPN3-210ENST00000561817 TGFBR3LH3BV60 316 aa6.12□□□□□ -1.43
CAPN3-210ENST00000561817 M0QX08 132 aa6.12□□□□□ -1.43
CAPN3-210ENST00000561817 EI24O14681 340 aa6.12□□□□□ -1.43
CAPN3-210ENST00000561817 PLD2O14939 933 aa6.12□□□□□ -1.43
CAPN3-210ENST00000561817 CASC3O15234 703 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms