RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 SFT2D3Q587I9 215 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 XKR6Q5GH73 641 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 ERMARDQ5T6L9 678 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 GARNL3Q5VVW2 1013 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 NSUN5P2Q63ZY6 315 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 LRRC8BQ6P9F7 803 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 FAM151BQ6UXP7 276 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 ZNF704Q6ZNC4 412 aaPredicted RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 CYP4Z2PQ8N1L4 340 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 C2orf73Q8N5S3 287 aaPredicted RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 PLPP5Q8NEB5 264 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 NFAM1Q8NET5 270 aaPredicted RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 MBD3L2Q8NHZ7 208 aaPredicted RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 HM13Q8TCT9 377 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 NSMCE1Q8WV22 266 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 ANKRD9Q96BM1 317 aaPredicted RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 TADA1Q96BN2 335 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 MSI2Q96DH6 328 aaKnown RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 TRMT61AQ96FX7 289 aaKnown RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 SPATA13Q96N96 652 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 QRFPRQ96P65 431 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 CSPG4P5Q96PW8 444 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 SIGLEC11Q96RL6 698 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 LPAR4Q99677 370 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 TSG101Q99816 390 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 RHNO1Q9BSD3 238 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 GPR63Q9BZJ6 419 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 PDCL3Q9H2J4 239 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 CHODLQ9H9P2 273 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 IL1RL2Q9HB29 575 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.38□□□□□ -1.87
HERC1-211ENST00000560983 SMOXQ9NWM0 555 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 PIH1D1Q9NWS0 290 aaKnown RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 ZNF226Q9NYT6 803 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 C19orf25Q9UFG5 118 aaPredicted RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 DNAJC12Q9UKB3 198 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 AMFRQ9UKV5 643 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 KCNS2Q9ULS6 477 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 LIPT1Q9Y234 373 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 HPSEQ9Y251 543 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 SCINQ9Y6U3 715 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 TENM3Q9P273 2699 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 GLYATL1P3A0A0U1RQE8 302 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.37□□□□□ -1.87
HERC1-211ENST00000560983 FRG2CA6NGY1 282 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 AGAP14A8MT82 685 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 H3BML4 177 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 AP4M1O00189 453 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 KPNA5O15131 536 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 PRPF4O43172 522 aaKnown RBP eCLIP3.37□□□□□ -1.87
HERC1-211ENST00000560983 SSX4O60224 188 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 KIAA0513O60268 411 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 AP2A1O95782 977 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 TOMM40O96008 361 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 SERPINC1P01008 464 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 CD8AP01732 235 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 PFKFB1P16118 471 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 CD9P21926 228 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 CA4P22748 312 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 SLCO1A2P46721 670 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 PRLHRP49683 370 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 MPP1Q00013 466 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 RPA4Q13156 261 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 PTK6Q13882 451 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 PTPRCAPQ14761 206 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 LARS2Q15031 903 aaKnown RBP3.37□□□□□ -1.87
HERC1-211ENST00000560983 PDK1Q15118 436 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 NSDHLQ15738 373 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 ZNF750Q32MQ0 723 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 MINDY4Q4G0A6 757 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 CCDC40Q4G0X9 1142 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 PPP6R3Q5H9R7 873 aaPredicted RBP3.37□□□□□ -1.87
HERC1-211ENST00000560983 VAX1Q5SQQ9 334 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 FAM166AQ6J272 317 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 ZNF474Q6S9Z5 364 aaPredicted RBP3.37□□□□□ -1.87
HERC1-211ENST00000560983 TMCO3Q6UWJ1 677 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 C9orf47Q6ZRZ4 202 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 PTCHD4Q6ZW05 846 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 RNF44Q7L0R7 432 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 MEPCEQ7L2J0 689 aaKnown RBP3.37□□□□□ -1.87
HERC1-211ENST00000560983 ZNF550Q7Z398 422 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 PCGF5Q86SE9 256 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 NT5DC3Q86UY8 548 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 ZBTB46Q86UZ6 589 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 SLC26A11Q86WA9 606 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 LRRC49Q8IUZ0 686 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 TBC1D21Q8IYX1 336 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 ATPAF2Q8N5M1 289 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 MSANTD4Q8NCY6 345 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 OR51Q1Q8NH59 317 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 OR5K2Q8NHB8 316 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 SLC44A1Q8WWI5 657 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 AKAP1Q92667 903 aaKnown RBP eCLIP3.37□□□□□ -1.87
HERC1-211ENST00000560983 KAT2AQ92830 837 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 TSLPQ969D9 159 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 CCDC47Q96A33 483 aaKnown RBP3.37□□□□□ -1.87
HERC1-211ENST00000560983 CABS1Q96KC9 395 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 PCDHB18PQ96TA0 734 aa3.37□□□□□ -1.87
HERC1-211ENST00000560983 SNRNP25Q9BV90 132 aaKnown RBP3.37□□□□□ -1.87
HERC1-211ENST00000560983 CALHM2Q9HA72 323 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms