RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 PCDH7O60245 1069 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 TPOP07202 933 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 IL3P08700 152 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 CELA3AP09093 270 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 CPA3P15088 417 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 CSNK2A2P19784 350 aaPredicted RBP13.53□□□□□ -0.24
IDH3A-219ENST00000560414 SOX18P35713 384 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 MAGEA5P43359 124 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 TRA2BP62995 288 aaKnown RBP13.53□□□□□ -0.24
IDH3A-219ENST00000560414 SLC18A2Q05940 514 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 ACSM2AQ08AH3 577 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 MGAT2Q10469 447 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 EXOSC7Q15024 291 aaKnown RBP13.53□□□□□ -0.24
IDH3A-219ENST00000560414 CDSNQ15517 529 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 LTB4RQ15722 352 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 PRICKLE4Q2TBC4 344 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 CFAP157Q5JU67 520 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 C6orf163Q5TEZ5 329 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 HLA-DQA1Q5Y7H0 255 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 ACSM2BQ68CK6 577 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 SP5Q6BEB4 398 aaPredicted RBP13.53□□□□□ -0.24
IDH3A-219ENST00000560414 RPTNQ6XPR3 784 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 FRMD7Q6ZUT3 714 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 CD163Q86VB7 1156 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 SLC22A16Q86VW1 577 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 ALDH16A1Q8IZ83 802 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 ZNF808Q8N4W9 903 aaPredicted RBP13.53□□□□□ -0.24
IDH3A-219ENST00000560414 FAM57AQ8TBR7 257 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 PAQR8Q8TEZ7 354 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 ADIPOR1Q96A54 375 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 CNRIP1Q96F85 164 aaPredicted RBP13.53□□□□□ -0.24
IDH3A-219ENST00000560414 EBPLQ9BY08 206 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 ZDHHC11Q9H8X9 412 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 IL1RL2Q9HB29 575 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 PROK2Q9HC23 129 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 OXSMQ9NWU1 459 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 MAT2BQ9NZL9 334 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.53□□□□□ -0.24
IDH3A-219ENST00000560414 PSME2Q9UL46 239 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 DTX4Q9Y2E6 619 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 LIPGQ9Y5X9 500 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 V9GYY5 206 aaPredicted RBP13.53□□□□□ -0.24
IDH3A-219ENST00000560414 DNAJC13O75165 2243 aa13.53□□□□□ -0.24
IDH3A-219ENST00000560414 ATP6AP2A0A1C7CYW4 349 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 CCDC151A5D8V7 595 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 ATP6AP2O75787 350 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 ATP1B1P05026 303 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 FBXW4P57775 412 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 DNAJB13P59910 316 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 KCNJ2P63252 427 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 MAP4K2Q12851 820 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 DUSP8Q13202 625 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 ART3Q13508 389 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 SPIN4Q56A73 249 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 SPDYAQ5MJ70 313 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 ARHGAP11AQ6P4F7 1023 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 RGS9BPQ6ZS82 235 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 C10orf107Q8IVU9 208 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 PRR22Q8IZ63 422 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 TAGAPQ8N103 731 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 VWA5B2Q8N398 1253 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 OR7G1Q8NGA0 311 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 RDH11Q8TC12 318 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 C16orf78Q8WTQ4 265 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 TP53INP1Q96A56 240 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 EXOSC8Q96B26 276 aaKnown RBP13.52□□□□□ -0.25
IDH3A-219ENST00000560414 ZNF681Q96N22 645 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 PFDN4Q9NQP4 134 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 BCAP29Q9UHQ4 241 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 UTS2RQ9UKP6 389 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 CNOT11Q9UKZ1 510 aaKnown RBP13.52□□□□□ -0.25
IDH3A-219ENST00000560414 CHCHD2Q9Y6H1 151 aaPredicted RBP13.52□□□□□ -0.25
IDH3A-219ENST00000560414 ZNF780BQ9Y6R6 833 aa13.52□□□□□ -0.25
IDH3A-219ENST00000560414 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.52□□□□□ -0.25
IDH3A-219ENST00000560414 NINQ8N4C6 2090 aa13.51□□□□□ -0.25
IDH3A-219ENST00000560414 NPIPA2E9PIF3 369 aa13.51□□□□□ -0.25
IDH3A-219ENST00000560414 E9PLN8 166 aa13.51□□□□□ -0.25
IDH3A-219ENST00000560414 NPIPA3F8WFD2 350 aa13.51□□□□□ -0.25
IDH3A-219ENST00000560414 CRCPO75575 148 aa13.51□□□□□ -0.25
IDH3A-219ENST00000560414 RFPL3SP0C7P2 107 aa13.51□□□□□ -0.25
IDH3A-219ENST00000560414 GPX3P22352 226 aa13.51□□□□□ -0.25
IDH3A-219ENST00000560414 HTR1EP28566 365 aa13.51□□□□□ -0.25
IDH3A-219ENST00000560414 TIA1P31483 386 aaKnown RBP eCLIP13.51□□□□□ -0.25
IDH3A-219ENST00000560414 SMSP52788 366 aa13.51□□□□□ -0.25
IDH3A-219ENST00000560414 MRPS35P82673 323 aaKnown RBP13.51□□□□□ -0.25
IDH3A-219ENST00000560414 NNATQ16517 81 aa13.51□□□□□ -0.25
IDH3A-219ENST00000560414 NTRK2Q16620 822 aa13.51□□□□□ -0.25
IDH3A-219ENST00000560414 TRMT12Q53H54 448 aaKnown RBP13.51□□□□□ -0.25
IDH3A-219ENST00000560414 BICRALQ6AI39 1079 aa13.51□□□□□ -0.25
IDH3A-219ENST00000560414 XKRXQ6PP77 449 aa13.51□□□□□ -0.25
IDH3A-219ENST00000560414 PAOXQ6QHF9 649 aa13.51□□□□□ -0.25
IDH3A-219ENST00000560414 FBXW8Q8N3Y1 598 aa13.51□□□□□ -0.25
IDH3A-219ENST00000560414 FAM109AQ8N4B1 249 aa13.51□□□□□ -0.25
IDH3A-219ENST00000560414 AENQ8WTP8 325 aaKnown RBP13.51□□□□□ -0.25
IDH3A-219ENST00000560414 C11orf24Q96F05 449 aaPredicted RBP13.51□□□□□ -0.25
IDH3A-219ENST00000560414 JSRP1Q96MG2 331 aaPredicted RBP13.51□□□□□ -0.25
IDH3A-219ENST00000560414 DMRTA2Q96SC8 542 aa13.51□□□□□ -0.25
IDH3A-219ENST00000560414 VKORC1Q9BQB6 163 aa13.51□□□□□ -0.25
IDH3A-219ENST00000560414 NXF5Q9H1B4 397 aaKnown RBP13.51□□□□□ -0.25
IDH3A-219ENST00000560414 ANKRA2Q9H9E1 313 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms