RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 HYAL4Q2M3T9 481 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 UNC50Q53HI1 259 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 PRAMEF9Q5VWM5 478 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 ADNP2Q6IQ32 1131 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 METTL2BQ6P1Q9 378 aaKnown RBP12.55□□□□□ -0.4
SMAD3-214ENST00000560402 ZNF793Q6ZN11 406 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 LAS2Q8IYD9 372 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 DND1Q8IYX4 353 aaKnown RBP12.55□□□□□ -0.4
SMAD3-214ENST00000560402 TEX9Q8N6V9 391 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 ACOT4Q8N9L9 421 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 OR5M3Q8NGP4 307 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 LILRB4Q8NHJ6 448 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 NUBPLQ8TB37 319 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 ACTRT2Q8TDY3 377 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 UBTD2Q8WUN7 234 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 F2RL3Q96RI0 385 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 CCT7Q99832 543 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 CENPKQ9BS16 269 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 CCDC106Q9BWC9 280 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 C1QTNF3Q9BXJ4 246 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 CD244Q9BZW8 370 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 OR8D2Q9GZM6 311 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 IL1RL2Q9HB29 575 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 MID1IP1Q9NPA3 183 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 SACM1LQ9NTJ5 587 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 MS4A12Q9NXJ0 267 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 ARMCX1Q9P291 453 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 ADGRE2Q9UHX3 823 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 ZDHHC2Q9UIJ5 367 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 ZNF490Q9ULM2 529 aaPredicted RBP12.55□□□□□ -0.4
SMAD3-214ENST00000560402 TRAF6Q9Y4K3 522 aa12.55□□□□□ -0.4
SMAD3-214ENST00000560402 A0A1B0GVC2 190 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 FAM90A27PA6NNH2 459 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 FAM166BA8MTA8 275 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 C17orf105B2RV13 164 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 E9PBE3 544 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 WWP2O00308 870 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 AQP7O14520 342 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 AZIN1O14977 448 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 CIB2O75838 187 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 RPS17P08708 135 aaKnown RBP12.54□□□□□ -0.4
SMAD3-214ENST00000560402 EPORP19235 508 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 TNNI3P19429 210 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 CNR1P21554 472 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 ATP5A1P25705 553 aaKnown RBP12.54□□□□□ -0.4
SMAD3-214ENST00000560402 SSR2P43308 183 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 ARFIP1P53367 373 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 PKNOX1P55347 436 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 KCNJ2P63252 427 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 ELF3P78545 371 aaPredicted RBP12.54□□□□□ -0.4
SMAD3-214ENST00000560402 IGLV3-21P80748 117 aaPredicted RBP12.54□□□□□ -0.4
SMAD3-214ENST00000560402 PLIN5Q00G26 463 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 CLCQ05315 142 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 TFF3Q07654 80 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 RIPK1Q13546 671 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 SNCBQ16143 134 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 MPEG1Q2M385 716 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 AP5B1Q2VPB7 878 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 MED27Q6P2C8 311 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 C16orf47Q6ZP98 133 aaPredicted RBP12.54□□□□□ -0.4
SMAD3-214ENST00000560402 CHSY3Q70JA7 882 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 MAVSQ7Z434 540 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 SLC22A8Q8TCC7 542 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 CMTM7Q96FZ5 175 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 DGAT2Q96PD7 388 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 PELOQ9BRX2 385 aaKnown RBP12.54□□□□□ -0.4
SMAD3-214ENST00000560402 SHCBP1LQ9BZQ2 653 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 DEFB127Q9H1M4 99 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 C1orf21Q9H246 121 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 MEAF6Q9HAF1 191 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 PRM3Q9NNZ6 103 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 KCNJ16Q9NPI9 418 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 OPTCQ9UBM4 332 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 PHF11Q9UIL8 331 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 ANGPTL3Q9Y5C1 460 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 ARHGAP21Q5T5U3 1957 aa12.54□□□□□ -0.4
SMAD3-214ENST00000560402 HIVEP1P15822 2718 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 PINLYPA6NC86 204 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 B2RBV5 119 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 FAM47E-STBD1D6RA91 191 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 K7EPI3 171 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 SUSD5O60279 629 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 WDR1O75083 606 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 LDB3O75112 727 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 SKAP2O75563 359 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-214ENST00000560402 PDE9AO76083 593 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 P04436 131 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 FGF4P08620 206 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 T-ENOLP0DO92 83 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 CPN2P22792 545 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 ACVR2AP27037 513 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 STT3AP46977 705 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 NUP107P57740 925 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 SQLEQ14534 574 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 SLC9B1Q4ZJI4 515 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 FBXO48Q5FWF7 155 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 EMC4Q5J8M3 183 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 KHDRBS2Q5VWX1 349 aaKnown RBP12.53□□□□□ -0.4
SMAD3-214ENST00000560402 GRHL2Q6ISB3 625 aa12.53□□□□□ -0.4
SMAD3-214ENST00000560402 SPNS3Q6ZMD2 512 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms