RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 LRCH3Q96II8 777 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 TAC3Q9UHF0 121 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 PPM1HQ9ULR3 514 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 DIRAS1O95057 198 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 NTSR2O95665 410 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 ITGB5P18084 799 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 RPS13P62277 151 aaKnown RBP13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 GK3PQ14409 553 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 PIP5K1AQ99755 562 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 ST6GALNAC5Q9BVH7 336 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 NFKBIEO00221 500 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 CAPN15O75808 1086 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 PAX6P26367 422 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 GSK3BP49841 420 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 ATG9BQ674R7 924 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 ELMOD3Q96FG2 381 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 RADILQ96JH8 1075 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 NENFQ9UMX5 172 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 DVL1O14640 695 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 NAA10P41227 235 aaPredicted RBP13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 MAP2K4P45985 399 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 DVL1P1P54792 670 aaPredicted RBP13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 KCNC3Q14003 757 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 GRIK5Q16478 980 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 IRF2BP2Q7Z5L9 587 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 DPPA2Q7Z7J5 298 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 SFXN5Q8TD22 340 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 PSMG2Q969U7 264 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 FKBP10Q96AY3 582 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 TBC1D20Q96BZ9 403 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 METTL2AQ96IZ6 378 aaKnown RBP13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 LRIG1Q96JA1 1093 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 UHRF1Q96T88 793 aaPredicted RBP13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 RBCK1Q9BYM8 510 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 SMIM35A0A1B0GVV1 85 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 AOC2O75106 756 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 HMGCS1Q01581 520 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 PRKCZQ05513 592 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 NDUFAF5Q5TEU4 345 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 TIGD3Q6B0B8 471 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 ARNTL2Q8WYA1 636 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 VSTM2BA6NLU5 285 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 GABARAPH6UMI1 98 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 MED6O75586 246 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 SCO1O75880 301 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 GABARAPO95166 117 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 HBE1P02100 147 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 UFM1P61960 85 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 TLE4Q04727 773 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 MEX3BQ6ZN04 569 aaKnown RBP13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 CBY3A6NI87 242 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 JUNDP17535 347 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 TCTE3Q8IZS6 198 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 TSTD1Q8NFU3 115 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR9K2Q8NGE7 335 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 PPTC7Q8NI37 304 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 SETD7Q8WTS6 366 aaKnown RBP13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 SGIP1Q9BQI5 828 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 CITO14578 2027 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 CEBPZOSA8MTT3 80 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 B4GALT4O60513 344 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 HTR3BO95264 441 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 CLEC3BP05452 202 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 SHMT1P34896 483 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 GABRA3P34903 492 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 APLNRP35414 380 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 ZFAND1Q8TCF1 268 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 SNX27Q96L92 541 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 RHCGQ9UBD6 479 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 ROBO3Q96MS0 1386 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 MYH7BA7E2Y1 1941 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 ABCA9Q8IUA7 1624 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 F6UZH7 168 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 ZNF207O43670 478 aaKnown RBP13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 CSTAP01040 98 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 PNMTP11086 282 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 NRLP54845 237 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 MAP4K2Q12851 820 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 HNRNPDQ14103 355 aaKnown RBP13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 HGSNATQ68CP4 663 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 SFRP4Q6FHJ7 346 aaPredicted RBP13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 NOXA1Q86UR1 476 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 BPHLQ86WA6 291 aaPredicted RBP13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 IQCKQ8N0W5 287 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 SMPDL3AQ92484 453 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 PRRT1Q99946 306 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 OCSTAMPQ9BR26 566 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 AK6Q9Y3D8 172 aaKnown RBP13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 IRAK2O43187 625 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 ITM2AO43736 263 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 TBX10O75333 385 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 JMJD7P0C870 316 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 CLCNKAP51800 687 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 DGKQP52824 942 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 ACY1Q03154 408 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 ZNF763Q0D2J5 394 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 MSMO1Q15800 293 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 ATP6AP1Q15904 470 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 RAET1LQ5VY80 246 aa13.25□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR9A2Q8NGT5 310 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms