RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 GIMAP5Q96F15 307 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 VMP1Q96GC9 406 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 ABHD17AQ96GS6 310 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 BBC3Q96PG8 261 aaPredicted RBP8.39□□□□□ -1.07
HMG20A-209ENST00000559728 SMAD5Q99717 465 aaKnown RBP8.39□□□□□ -1.07
HMG20A-209ENST00000559728 DUSP26Q9BV47 211 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 CNPPD1Q9BV87 410 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 DPY30Q9C005 99 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 CXorf36Q9H7Y0 433 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 LIN28AQ9H9Z2 209 aaKnown RBP8.39□□□□□ -1.07
HMG20A-209ENST00000559728 ADAM21Q9UKJ8 722 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 PCDHGA9Q9Y5G4 932 aaKnown RBP8.39□□□□□ -1.07
HMG20A-209ENST00000559728 CLCA3PQ9Y6N3 262 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 CCDC88CQ9P219 2028 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 A0A087WV62 115 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 A0A1W2PRB8 838 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 ERVH48-1M5A8F1 160 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 SLC22A3O75751 556 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 C6orf47O95873 294 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 TROVE2P10155 538 aaKnown RBP eCLIP8.38□□□□□ -1.07
HMG20A-209ENST00000559728 ICAM2P13598 275 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 CAPN3P20807 821 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 ITGA3P26006 1051 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 PTPN6P29350 595 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 MPIP34949 423 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 RPL3P39023 403 aaKnown RBP8.38□□□□□ -1.07
HMG20A-209ENST00000559728 CDKN2CP42773 168 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 CLCN2P51788 898 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 CLNS1AP54105 237 aaKnown RBP8.38□□□□□ -1.07
HMG20A-209ENST00000559728 MLF1P58340 268 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 HBA1P69905 142 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 RNF4P78317 190 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 KCNAB2Q13303 367 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 RCAN2Q14206 197 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 TLR1Q15399 786 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 PGS1Q32NB8 556 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 ACER2Q5QJU3 275 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 METTL21CQ5VZV1 264 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 TCTN3Q6NUS6 607 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 TMEM107Q6UX40 140 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 HSDL2Q6YN16 418 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 SPATA21Q7Z572 469 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 MIER2Q8N344 545 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 GLB1L3Q8NCI6 653 aaPredicted RBP8.38□□□□□ -1.07
HMG20A-209ENST00000559728 OR7G1Q8NGA0 311 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 OR52R1Q8NGF1 315 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 C16orf52Q8NHV5 167 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 OR5P2Q8WZ92 322 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 ZBED6CLQ96FA7 236 aaPredicted RBP8.38□□□□□ -1.07
HMG20A-209ENST00000559728 VPS50Q96JG6 964 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 BBS4Q96RK4 519 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 ELAC2Q9BQ52 826 aaKnown RBP8.38□□□□□ -1.07
HMG20A-209ENST00000559728 OR10A5Q9H207 317 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 RABEP2Q9H5N1 569 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 EPS8L2Q9H6S3 715 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 SAR1AQ9NR31 198 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 SLC6A13Q9NSD5 602 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 GPR83Q9NYM4 423 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 PTGFRNQ9P2B2 879 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 C19orf53Q9UNZ5 99 aaPredicted RBP8.38□□□□□ -1.07
HMG20A-209ENST00000559728 ENTPD4Q9Y227 616 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 CSAG2Q9Y5P2 127 aa8.38□□□□□ -1.07
HMG20A-209ENST00000559728 BOD1L1Q8NFC6 3051 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 PRSS51A0A1B0GVH4 220 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 FAM234BA2RU67 622 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 RNASET2O00584 256 aaKnown RBP8.37□□□□□ -1.07
HMG20A-209ENST00000559728 ZFAND5O76080 213 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 PGRP06401 933 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 NTSP30990 170 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 KIR3DL1P43629 444 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 POLR2JP52435 117 aaKnown RBP8.37□□□□□ -1.07
HMG20A-209ENST00000559728 MANFP55145 182 aaKnown RBP8.37□□□□□ -1.07
HMG20A-209ENST00000559728 SRSF11Q05519 484 aaKnown RBP8.37□□□□□ -1.07
HMG20A-209ENST00000559728 HSPB3Q12988 150 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 MFAP5Q13361 173 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 GAB1Q13480 694 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 UBAP2LQ14157 1087 aaKnown RBP8.37□□□□□ -1.07
HMG20A-209ENST00000559728 SQLEQ14534 574 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 LAPTM4AQ15012 233 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 CRB2Q5IJ48 1285 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 IGFL3Q6UXB1 125 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 NPSR1Q6W5P4 371 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 ANKRD46Q86W74 232 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 RPS19BP1Q86WX3 136 aaKnown RBP8.37□□□□□ -1.07
HMG20A-209ENST00000559728 LGI4Q8N135 537 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 CLEC4FQ8N1N0 589 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 GOT1L1Q8NHS2 421 aaPredicted RBP8.37□□□□□ -1.07
HMG20A-209ENST00000559728 NUBPLQ8TB37 319 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 THAP3Q8WTV1 239 aaPredicted RBP8.37□□□□□ -1.07
HMG20A-209ENST00000559728 GTF2H4Q92759 462 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 VPS33AQ96AX1 596 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 ERP27Q96DN0 273 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 FAM120BQ96EK7 910 aaKnown RBP8.37□□□□□ -1.07
HMG20A-209ENST00000559728 VSTM2LQ96N03 204 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 RILPQ96NA2 401 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 CCDC115Q96NT0 180 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 LMF1Q96S06 567 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 INPP5KQ9BT40 448 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 ITPAQ9BY32 194 aa8.37□□□□□ -1.07
HMG20A-209ENST00000559728 NMUR2Q9GZQ4 415 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms