RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 NLNQ9BYT8 704 aa3.99□□□□□ -1.77
SPG11-211ENST00000558561 TXLNGYQ9BZA5 131 aa3.99□□□□□ -1.77
SPG11-211ENST00000558561 CCDC68Q9H2F9 335 aa3.99□□□□□ -1.77
SPG11-211ENST00000558561 RHOJQ9H4E5 214 aa3.99□□□□□ -1.77
SPG11-211ENST00000558561 ZBTB26Q9HCK0 441 aa3.99□□□□□ -1.77
SPG11-211ENST00000558561 IRAK4Q9NWZ3 460 aa3.99□□□□□ -1.77
SPG11-211ENST00000558561 TAS2R13Q9NYV9 303 aa3.99□□□□□ -1.77
SPG11-211ENST00000558561 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.99□□□□□ -1.77
SPG11-211ENST00000558561 TP53TG5Q9Y2B4 290 aa3.99□□□□□ -1.77
SPG11-211ENST00000558561 UTP11Q9Y3A2 253 aaKnown RBP3.99□□□□□ -1.77
SPG11-211ENST00000558561 PTRH2Q9Y3E5 179 aaKnown RBP3.99□□□□□ -1.77
SPG11-211ENST00000558561 V9GYY5 206 aaPredicted RBP3.99□□□□□ -1.77
SPG11-211ENST00000558561 TLN1Q9Y490 2541 aaKnown RBP3.99□□□□□ -1.77
SPG11-211ENST00000558561 ZNF462Q96JM2 2506 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 SVILO95425 2214 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 ARHGAP10A1A4S6 786 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 VSTM2BA6NLU5 285 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 A8MUA0 341 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 GOLGA8RI6L899 631 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 UBXN8O00124 270 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 RTCAO00442 366 aaKnown RBP3.98□□□□□ -1.77
SPG11-211ENST00000558561 DSCR3O14972 297 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 EIF3HO15372 352 aaKnown RBP eCLIP3.98□□□□□ -1.772e-6■■■■■ 27.8
SPG11-211ENST00000558561 ZSCAN9O15535 394 aaPredicted RBP3.98□□□□□ -1.77
SPG11-211ENST00000558561 SUV39H1O43463 412 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 SPRY2O43597 315 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 OR1F1O43749 312 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 PRKNO60260 465 aaPredicted RBP3.98□□□□□ -1.77
SPG11-211ENST00000558561 SIX3O95343 332 aaPredicted RBP3.98□□□□□ -1.77
SPG11-211ENST00000558561 ALDOAP04075 364 aaKnown RBP3.98□□□□□ -1.77
SPG11-211ENST00000558561 SHBGP04278 402 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 SERPIND1P05546 499 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 KLK3P07288 261 aaPredicted RBP3.98□□□□□ -1.77
SPG11-211ENST00000558561 NPSP0C0P6 89 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 CTAGE8P0CG41 777 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 SMIM10L1P0DMW3 83 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 PLA2G2AP14555 144 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 CREB1P16220 341 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 IL1RNP18510 177 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 TSPAN8P19075 237 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 TFEBP19484 476 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 ATP5DP30049 168 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 GP5P40197 560 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 SLC26A3P40879 764 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 SLC6A12P48065 614 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 NR0B1P51843 470 aaKnown RBP3.98□□□□□ -1.77
SPG11-211ENST00000558561 HNRNPFP52597 415 aaKnown RBP3.98□□□□□ -1.77
SPG11-211ENST00000558561 RAB8AP61006 207 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 RPS15P62841 145 aaKnown RBP3.98□□□□□ -1.77
SPG11-211ENST00000558561 KLC1Q07866 573 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 CALCOCO2Q13137 446 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 NCF4Q15080 339 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 ZKSCAN8Q15776 578 aaPredicted RBP3.98□□□□□ -1.77
SPG11-211ENST00000558561 WHAMMP3Q1A5X7 153 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 GRTP1Q5TC63 336 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 ABLIM2Q6H8Q1 611 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 C8orf74Q6P047 294 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 TTC23LQ6PF05 361 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 LCTLQ6UWM7 567 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 LANCL3Q6ZV70 420 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 CYS1Q717R9 158 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 GALNT7Q86SF2 657 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 GPSM1Q86YR5 675 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 CTAGE4Q8IX94 777 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 LMNTD2Q8IXW0 634 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 SIRT6Q8N6T7 355 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 CSNK1A1LQ8N752 337 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 RBMXL3Q8N7X1 1067 aaKnown RBP3.98□□□□□ -1.77
SPG11-211ENST00000558561 BOLLQ8N9W6 283 aaKnown RBP3.98□□□□□ -1.77
SPG11-211ENST00000558561 BBOF1Q8ND07 529 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 ZCCHC10Q8TBK6 192 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 STT3BQ8TCJ2 826 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 CREB3L4Q8TEY5 395 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 DCAKDQ8WVC6 231 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 PSMF1Q92530 271 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 N4BP2L2Q92802 583 aaPredicted RBP3.98□□□□□ -1.77
SPG11-211ENST00000558561 FBXL8Q96CD0 374 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 MMABQ96EY8 250 aaPredicted RBP3.98□□□□□ -1.77
SPG11-211ENST00000558561 SMIM10Q96HG1 83 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 LRFN5Q96NI6 719 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 RUNDC3BQ96NL0 473 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 ATOH8Q96SQ7 321 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 THAP7Q9BT49 309 aaPredicted RBP3.98□□□□□ -1.77
SPG11-211ENST00000558561 NAT9Q9BTE0 207 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 SORBS1Q9BX66 1292 aaKnown RBP3.98□□□□□ -1.77
SPG11-211ENST00000558561 TSSK1BQ9BXA7 367 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 SLC7A5P2Q9GIP4 190 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 CHRNA10Q9GZZ6 450 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 ING2Q9H160 280 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 ALG9Q9H6U8 611 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 ZNF304Q9HCX3 659 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 TMEM184CQ9NVA4 438 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 P4HTMQ9NXG6 502 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 ARL15Q9NXU5 204 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 SPATA7Q9P0W8 599 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 HCN3Q9P1Z3 774 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 IFT80Q9P2H3 777 aaPredicted RBP3.98□□□□□ -1.77
SPG11-211ENST00000558561 C11orf21Q9P2W6 132 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 CTNNAL1Q9UBT7 734 aa3.98□□□□□ -1.77
SPG11-211ENST00000558561 TAGLN3Q9UI15 199 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms