RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 COMMD4Q9H0A8 199 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 SEC61A2Q9H9S3 476 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 FAM212BQ9NTI7 297 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-248ENST00000558190 MED31Q9Y3C7 131 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 MICAL3Q7RTP6 2002 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 FAM72CH0Y354 149 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 C8orf89P0DMQ9 161 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 CAPN3P20807 821 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 CCR6P51684 374 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 FAM72AQ5TYM5 149 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 FAM72DQ6L9T8 149 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 FAM72BQ86X60 149 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 OR5M11Q96RB7 305 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 SDHAF3Q9NRP4 125 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 NDRG2Q9UN36 371 aaKnown RBP3.52□□□□□ -1.85
ATXN3-248ENST00000558190 A0A0G2JMP0 313 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 FAAHO00519 579 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 YY2O15391 372 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 FFAR2O15552 330 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 CD1DP15813 335 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 FUT1P19526 365 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ERVPABLB-1P60509 514 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 CAMK2BQ13554 666 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF678Q5SXM1 525 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF648Q5T619 568 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-248ENST00000558190 OOSP2Q86WS3 158 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 OR4M2Q8NGB6 313 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 KCNN1Q92952 543 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 NTMT1Q9BV86 223 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 SPATA6Q9NWH7 488 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-248ENST00000558190 OSER1Q9NX31 292 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ACTR10Q9NZ32 417 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 SLC33A1O00400 549 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-248ENST00000558190 AMY2AP04746 511 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 SLC14A1Q13336 389 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ZDHHC12Q96GR4 267 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 TGM7Q96PF1 710 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 WDR18Q9BV38 432 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 DUSP21Q9H596 190 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF609O15014 1411 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 SLC25A12O75746 678 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 RAB3DO95716 219 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 MAPK9P45984 424 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 PTCHD3Q3KNS1 767 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ZDHHC20Q5W0Z9 365 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 LRRTM1Q86UE6 522 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 OR2G2Q8NGZ5 317 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 LINC01599Q8WXQ3 324 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 OSMRQ99650 979 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 HERPUD2Q9BSE4 406 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 IER2Q9BTL4 223 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 FAM96BQ9Y3D0 163 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 CACNA1CQ13936 2221 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 H7C417 338 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 NPC1O15118 1278 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 STATHP02808 62 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 HSD3B1P14060 373 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 SHFQ7M4L6 423 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 OR10H5Q8NGA6 315 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF563Q8TA94 476 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 GEMIN6Q8WXD5 167 aaKnown RBP3.52□□□□□ -1.85
ATXN3-248ENST00000558190 MYOZ2Q9NPC6 264 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 TMEM248Q9NWD8 314 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 SAGE1Q9NXZ1 904 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 OR6C76A6NM76 312 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 KCNJ3P48549 501 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 OR52W1Q6IF63 320 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 SLC22A15Q8IZD6 547 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 RSPH9Q9H1X1 276 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-248ENST00000558190 AATKQ6ZMQ8 1374 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ASXL2Q76L83 1435 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 FLT4P35916 1363 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 MBP02144 154 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 AMD1P17707 334 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 UGCGQ16739 394 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 NBPF12Q5TAG4 269 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-248ENST00000558190 TMEM145Q8NBT3 493 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 OR5P2Q8WZ92 322 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 SORCS2Q96PQ0 1159 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 NELL2Q99435 816 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.52□□□□□ -1.851e-11■■■■□ 25.2
ATXN3-248ENST00000558190 GPRC5BQ9NZH0 403 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 A8MVJ9 347 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 QSOX1O00391 747 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 IL1BP01584 269 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 CTSHP09668 335 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 HNF1AP20823 631 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 MAPK3P27361 379 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-248ENST00000558190 HCCSP53701 268 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ILKQ13418 452 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 OR2AG1Q9H205 316 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 YJEFN3A6XGL0 299 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF670-ZNF695F2Z2N8 137 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 TMX2-CTNND1H3BSU7 103 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 M0R2N6 131 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 TNFSF12O43508 249 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 FKTNO75072 461 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 GNRHRP30968 328 aa3.52□□□□□ -1.85
ATXN3-248ENST00000558190 HMGCLP35914 325 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms