RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 ANKRD20A3Q5VUR7 823 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 AP1ARQ63HQ0 302 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 IYDQ6PHW0 289 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 OLFM4Q6UX06 510 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 GBP6Q6ZN66 633 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 OTOAQ7RTW8 1153 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 VASH2Q86V25 355 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 TMEM126BQ8IUX1 230 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 WDR49Q8IV35 697 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 CLYBLQ8N0X4 340 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 ZNF671Q8TAW3 534 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 GDAP1Q8TB36 358 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 FBXO25Q8TCJ0 367 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 VN1R17PQ8TDU5 208 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 GTSF1Q8WW33 167 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 SHC3Q92529 594 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 CFAP36Q96G28 342 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 CCDC43Q96MW1 224 aaKnown RBP2.47□□□□□ -2.01
SPG11-206ENST00000558093 PANX3Q96QZ0 392 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 S1PR3Q99500 378 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 MAPKAP1Q9BPZ7 522 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 IL1RL2Q9HB29 575 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 GDF3Q9NR23 364 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 DNAJC17Q9NVM6 304 aaKnown RBP2.47□□□□□ -2.01
SPG11-206ENST00000558093 DDX18Q9NVP1 670 aaKnown RBP2.47□□□□□ -2.01
SPG11-206ENST00000558093 UBAP1Q9NZ09 502 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 AKAP7Q9P0M2 348 aaPredicted RBP2.47□□□□□ -2.01
SPG11-206ENST00000558093 SENP1Q9P0U3 644 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 RCOR3Q9P2K3 495 aaPredicted RBP2.47□□□□□ -2.01
SPG11-206ENST00000558093 PSORS1C1Q9UIG5 152 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 PTBP2Q9UKA9 531 aaKnown RBP2.47□□□□□ -2.01
SPG11-206ENST00000558093 EXOC7Q9UPT5 735 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 KCNK6Q9Y257 313 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 AP1M2Q9Y6Q5 423 aa2.47□□□□□ -2.01
SPG11-206ENST00000558093 BRD4O60885 1362 aaPredicted RBP2.47□□□□□ -2.01
SPG11-206ENST00000558093 AKNAQ7Z591 1439 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 TRABD2BA6NFA1 517 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 KIF2AO00139 706 aaPredicted RBP2.46□□□□□ -2.02
SPG11-206ENST00000558093 SGK1O00141 431 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 E2F3O00716 465 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 PRPSAP2O60256 369 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 KERAO60938 352 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 SEC22BO75396 215 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 HEXBP07686 556 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 SBK2P0C263 348 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 ZNF853P0CG23 659 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 MBL2P11226 248 aaPredicted RBP2.46□□□□□ -2.02
SPG11-206ENST00000558093 HLA-DPA1P20036 260 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 CD9P21926 228 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 MTIF2P46199 727 aaKnown RBP2.46□□□□□ -2.02
SPG11-206ENST00000558093 ASMTP46597 345 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 SLC7A2P52569 658 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 SLC12A3P55017 1021 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 CCNA1P78396 465 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 PRKCEQ02156 737 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 GABPAQ06546 454 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 ACTN3Q08043 901 aaPredicted RBP2.46□□□□□ -2.02
SPG11-206ENST00000558093 NFE2L1Q14494 772 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 SLC10A1Q14973 349 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 OR1C1Q15619 314 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 TRADDQ15628 312 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 ZNF79Q15937 498 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 PPP1R3AQ16821 1122 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 IMMTQ16891 758 aaKnown RBP2.46□□□□□ -2.02
SPG11-206ENST00000558093 ANKRD55Q3KP44 614 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 CEP55Q53EZ4 464 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 C11orf88Q6PI97 169 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 ANGPTL8Q6UXH0 198 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 PAMR1Q6UXH9 720 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 RGS9BPQ6ZS82 235 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 PIWIL3Q7Z3Z3 882 aaKnown RBP2.46□□□□□ -2.02
SPG11-206ENST00000558093 TMEM110Q86TL2 294 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 ASPGQ86U10 573 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 KRTAP11-1Q8IUC1 163 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 MYOCDQ8IZQ8 938 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 ZNF525Q8N782 197 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 ZNF491Q8N8L2 437 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 CHDHQ8NE62 594 aaPredicted RBP2.46□□□□□ -2.02
SPG11-206ENST00000558093 CCDC148Q8NFR7 591 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 SUN5Q8TC36 379 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.46□□□□□ -2.02
SPG11-206ENST00000558093 PTP4A1Q93096 173 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 SNRNP40Q96DI7 357 aaKnown RBP2.46□□□□□ -2.02
SPG11-206ENST00000558093 GUCD1Q96NT3 240 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 DEFB126Q9BYW3 111 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 TNMDQ9H2S6 317 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 RNF41Q9H4P4 317 aaPredicted RBP2.46□□□□□ -2.02
SPG11-206ENST00000558093 THAP9Q9H5L6 903 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 RNPEPL1Q9HAU8 725 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 TIGARQ9NQ88 270 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 ANAPC11Q9NYG5 84 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 MIS18AQ9NYP9 233 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 SPG21Q9NZD8 308 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 NYAP2Q9P242 653 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 MRTO4Q9UKD2 239 aaKnown RBP2.46□□□□□ -2.02
SPG11-206ENST00000558093 CLEC4EQ9ULY5 219 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 KIF3AQ9Y496 699 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 TMEM94Q12767 1356 aa2.46□□□□□ -2.02
SPG11-206ENST00000558093 KLF18A0A0U1RQI7 1052 aa2.45□□□□□ -2.02
SPG11-206ENST00000558093 EFCAB7A8K855 629 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms