RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 MC3RP41968 323 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 TUBA3CQ13748 450 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 NADK2Q4G0N4 442 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 HLA-DQA1Q5Y7H0 255 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 TUBA3EQ6PEY2 450 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 CAMKMTQ7Z624 323 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 TESCQ96BS2 214 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 ANKRD10Q9NXR5 420 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 CPAMD8Q8IZJ3 1885 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 A0A087WV62 115 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 CDK2AP1O14519 115 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 CD96P40200 585 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 SSR4P51571 173 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 OC90Q02509 493 aaPredicted RBP23.67■■□□□ 1.38
SMAD6-202ENST00000557916 SRSF11Q05519 484 aaKnown RBP23.67■■□□□ 1.38
SMAD6-202ENST00000557916 FHL5Q5TD97 284 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 ZNF468Q5VIY5 522 aaPredicted RBP23.67■■□□□ 1.38
SMAD6-202ENST00000557916 Q6ZS92 163 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 CATSPER1Q8NEC5 780 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 ELP4Q96EB1 424 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 TEX37Q96LM6 180 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 RASL10BQ96S79 203 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.67■■□□□ 1.38
SMAD6-202ENST00000557916 CLMPQ9H6B4 373 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 PRODH2Q9UF12 536 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 CNTRLQ7Z7A1 2325 aa23.66■■□□□ 1.38
SMAD6-202ENST00000557916 SPTA1P02549 2419 aa23.66■■□□□ 1.38
SMAD6-202ENST00000557916 TROVE2P10155 538 aaKnown RBP eCLIP23.66■■□□□ 1.38
SMAD6-202ENST00000557916 TRHRP34981 398 aaPredicted RBP23.66■■□□□ 1.38
SMAD6-202ENST00000557916 CASRP41180 1078 aa23.66■■□□□ 1.38
SMAD6-202ENST00000557916 TNFSF10P50591 281 aa23.66■■□□□ 1.38
SMAD6-202ENST00000557916 MLC1Q15049 377 aa23.66■■□□□ 1.38
SMAD6-202ENST00000557916 PDCD4Q53EL6 469 aaKnown RBP23.66■■□□□ 1.38
SMAD6-202ENST00000557916 SLC6A19Q695T7 634 aa23.66■■□□□ 1.38
SMAD6-202ENST00000557916 OR4F3Q6IEY1 312 aa23.66■■□□□ 1.38
SMAD6-202ENST00000557916 TMEM156Q8N614 296 aa23.66■■□□□ 1.38
SMAD6-202ENST00000557916 OR8J2Q8NGG1 315 aa23.66■■□□□ 1.38
SMAD6-202ENST00000557916 STON2Q8WXE9 905 aa23.66■■□□□ 1.38
SMAD6-202ENST00000557916 MAGED4Q96JG8 741 aa23.66■■□□□ 1.38
SMAD6-202ENST00000557916 C19orf53Q9UNZ5 99 aaPredicted RBP23.66■■□□□ 1.38
SMAD6-202ENST00000557916 B3GNT3Q9Y2A9 372 aa23.66■■□□□ 1.38
SMAD6-202ENST00000557916 DTX4Q9Y2E6 619 aa23.66■■□□□ 1.38
SMAD6-202ENST00000557916 BSNQ9UPA5 3926 aa23.66■■□□□ 1.38
SMAD6-202ENST00000557916 A0A0G2JND7 137 aa23.65■■□□□ 1.38
SMAD6-202ENST00000557916 GPX3P22352 226 aa23.65■■□□□ 1.38
SMAD6-202ENST00000557916 KIR3DL1P43629 444 aa23.65■■□□□ 1.38
SMAD6-202ENST00000557916 CYB561P49447 251 aa23.65■■□□□ 1.38
SMAD6-202ENST00000557916 EMDP50402 254 aa23.65■■□□□ 1.38
SMAD6-202ENST00000557916 HLCSP50747 726 aa23.65■■□□□ 1.38
SMAD6-202ENST00000557916 CDK9P50750 372 aaKnown RBP23.65■■□□□ 1.38
SMAD6-202ENST00000557916 TLR1Q15399 786 aa23.65■■□□□ 1.38
SMAD6-202ENST00000557916 DPY19L1Q2PZI1 675 aa23.65■■□□□ 1.38
SMAD6-202ENST00000557916 PIGGQ5H8A4 983 aa23.65■■□□□ 1.38
SMAD6-202ENST00000557916 COLEC12Q5KU26 742 aa23.65■■□□□ 1.38
SMAD6-202ENST00000557916 ZNF441Q8N8Z8 693 aa23.65■■□□□ 1.38
SMAD6-202ENST00000557916 OR5P2Q8WZ92 322 aa23.65■■□□□ 1.38
SMAD6-202ENST00000557916 ADIPOR1Q96A54 375 aa23.65■■□□□ 1.38
SMAD6-202ENST00000557916 PNPLA2Q96AD5 504 aa23.65■■□□□ 1.38
SMAD6-202ENST00000557916 ZBTB18Q99592 522 aa23.65■■□□□ 1.38
SMAD6-202ENST00000557916 SDR39U1Q9NRG7 319 aaPredicted RBP23.65■■□□□ 1.38
SMAD6-202ENST00000557916 DDX18Q9NVP1 670 aaKnown RBP23.65■■□□□ 1.38
SMAD6-202ENST00000557916 UPK1AO00322 258 aa23.64■■□□□ 1.37
SMAD6-202ENST00000557916 SLC22A3O75751 556 aa23.64■■□□□ 1.37
SMAD6-202ENST00000557916 IFI6P09912 130 aa23.64■■□□□ 1.37
SMAD6-202ENST00000557916 IL12AP29459 219 aa23.64■■□□□ 1.37
SMAD6-202ENST00000557916 OR1C1Q15619 314 aa23.64■■□□□ 1.37
SMAD6-202ENST00000557916 FAM174BQ3ZCQ3 159 aa23.64■■□□□ 1.37
SMAD6-202ENST00000557916 PLEKHN1Q494U1 663 aaPredicted RBP23.64■■□□□ 1.37
SMAD6-202ENST00000557916 SPANXN4Q5MJ08 99 aa23.64■■□□□ 1.37
SMAD6-202ENST00000557916 OR2L13Q8N349 312 aa23.64■■□□□ 1.37
SMAD6-202ENST00000557916 SLC22A8Q8TCC7 542 aa23.64■■□□□ 1.37
SMAD6-202ENST00000557916 ASB15Q8WXK1 588 aa23.64■■□□□ 1.37
SMAD6-202ENST00000557916 TP53INP1Q96A56 240 aa23.64■■□□□ 1.37
SMAD6-202ENST00000557916 RILPQ96NA2 401 aa23.64■■□□□ 1.37
SMAD6-202ENST00000557916 ZNF317Q96PQ6 595 aaPredicted RBP23.64■■□□□ 1.37
SMAD6-202ENST00000557916 ITPAQ9BY32 194 aa23.64■■□□□ 1.37
SMAD6-202ENST00000557916 TAS2R9Q9NYW1 312 aa23.64■■□□□ 1.37
SMAD6-202ENST00000557916 ZIM2Q9NZV7 527 aa23.64■■□□□ 1.37
SMAD6-202ENST00000557916 LRFN1Q9P244 771 aa23.64■■□□□ 1.37
SMAD6-202ENST00000557916 HEMK1Q9Y5R4 338 aaPredicted RBP23.64■■□□□ 1.37
SMAD6-202ENST00000557916 ZNF354AO60765 605 aaPredicted RBP23.63■■□□□ 1.37
SMAD6-202ENST00000557916 COQ9O75208 318 aa23.63■■□□□ 1.37
SMAD6-202ENST00000557916 C6orf47O95873 294 aa23.63■■□□□ 1.37
SMAD6-202ENST00000557916 S100A3P33764 101 aa23.63■■□□□ 1.37
SMAD6-202ENST00000557916 SOX3P41225 446 aa23.63■■□□□ 1.37
SMAD6-202ENST00000557916 NR0B1P51843 470 aaKnown RBP23.63■■□□□ 1.37
SMAD6-202ENST00000557916 WNT3P56703 355 aa23.63■■□□□ 1.37
SMAD6-202ENST00000557916 ZNF169Q14929 603 aaPredicted RBP23.63■■□□□ 1.37
SMAD6-202ENST00000557916 SPINK14Q6IE38 97 aa23.63■■□□□ 1.37
SMAD6-202ENST00000557916 CGB2Q6NT52 195 aa23.63■■□□□ 1.37
SMAD6-202ENST00000557916 MIER2Q8N344 545 aa23.63■■□□□ 1.37
SMAD6-202ENST00000557916 GLB1L3Q8NCI6 653 aaPredicted RBP23.63■■□□□ 1.37
SMAD6-202ENST00000557916 C17orf47Q8NEP4 570 aa23.63■■□□□ 1.37
SMAD6-202ENST00000557916 SIGLEC12Q96PQ1 595 aa23.63■■□□□ 1.37
SMAD6-202ENST00000557916 TRIM45Q9H8W5 580 aaPredicted RBP23.63■■□□□ 1.37
SMAD6-202ENST00000557916 ANAPC2Q9UJX6 822 aa23.63■■□□□ 1.37
SMAD6-202ENST00000557916 SMG1Q96Q15 3661 aaKnown RBP23.63■■□□□ 1.37
SMAD6-202ENST00000557916 TRAV17A0A0B4J275 112 aa23.62■■□□□ 1.37
SMAD6-202ENST00000557916 C9JVG2 144 aa23.62■■□□□ 1.37
SMAD6-202ENST00000557916 CFLARO15519 480 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms