RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 ID1P41134 155 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 ATP5OP48047 213 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 LEPRP48357 1165 aaKnown RBP2.72□□□□□ -1.97
TRAV28-201ENST00000557548 SGSHP51688 502 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 NDST1P52848 882 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 RAG2P55895 527 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 HERVK_113P63132 956 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 ERVK-8P63133 956 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 CBX1P83916 185 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 CDKL1Q00532 357 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 BEX3Q00994 111 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 TNFRSF17Q02223 184 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 GUCY2DQ02846 1103 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 MECOMQ03112 1051 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 HNRNPDQ14103 355 aaKnown RBP2.72□□□□□ -1.97
TRAV28-201ENST00000557548 SYCP1Q15431 976 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 TAB1Q15750 504 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 CAMK4Q16566 473 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 DCAF4L1Q3SXM0 396 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 KIAA1644Q3SXP7 199 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 KCTD21Q4G0X4 260 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 CAVIN4Q5BKX8 364 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 TTC23Q5W5X9 447 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 WASH2PQ6VEQ5 465 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 GDPD4Q6W3E5 623 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 CENPUQ71F23 418 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 ZNF771Q7L3S4 317 aaPredicted RBP2.72□□□□□ -1.97
TRAV28-201ENST00000557548 PTAR1Q7Z6K3 402 aaPredicted RBP2.72□□□□□ -1.97
TRAV28-201ENST00000557548 LUZP1Q86V48 1076 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 PYROXD2Q8N2H3 581 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 LRRC43Q8N309 656 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 DCLK2Q8N568 766 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 CCDC148Q8NFR7 591 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 OR5AP2Q8NGF4 316 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 OR56B2PQ8NGI1 322 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 OR10G8Q8NGN5 311 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 OR5M9Q8NGP3 310 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 RLN3Q8WXF3 142 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 PRAC1Q96KF2 57 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 CASD1Q96PB1 797 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 ERVK-6Q9BXR3 956 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 DCTPP1Q9H773 170 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 MEAF6Q9HAF1 191 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 TM9SF3Q9HD45 589 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 TRPV5Q9NQA5 729 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 STARD5Q9NSY2 213 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 C1orf123Q9NWV4 160 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 TEX10Q9NXF1 929 aaPredicted RBP2.72□□□□□ -1.97
TRAV28-201ENST00000557548 ERRFI1Q9UJM3 462 aaPredicted RBP2.72□□□□□ -1.97
TRAV28-201ENST00000557548 IKZF3Q9UKT9 509 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 MRPL11Q9Y3B7 192 aaKnown RBP2.72□□□□□ -1.97
TRAV28-201ENST00000557548 WIPI2Q9Y4P8 454 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 SPACA6W5XKT8 324 aa2.72□□□□□ -1.97
TRAV28-201ENST00000557548 KIF16BQ96L93 1317 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 TRIP12Q14669 1992 aaPredicted RBP2.71□□□□□ -1.98
TRAV28-201ENST00000557548 PTCH1Q13635 1447 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 ARPC4-TTLL3A0A0A6YYG9 625 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 LINC00854A0A1B0GVQ3 168 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 SMIM1B2RUZ4 78 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 PPIAL4DF5H284 164 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 H3BTX0 84 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 ALOX15BO15296 676 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 BUB3O43684 328 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 TSPAN2O60636 221 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 JAK2O60674 1132 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 SNNO75324 88 aaPredicted RBP2.71□□□□□ -1.98
TRAV28-201ENST00000557548 BCAS1O75363 584 aaPredicted RBP2.71□□□□□ -1.98
TRAV28-201ENST00000557548 ANP32DO95626 131 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 IGKV2-30P06310 120 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 GSTA1P08263 222 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 RHOXF2BP0C7M4 288 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 CEBPBP17676 345 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 HNF1AP20823 631 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 UQCRC2P22695 453 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 GPR183P32249 361 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 MAP2K2P36507 400 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 AIF1P55008 147 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 PAX9P55771 341 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 NANOS2P60321 138 aaKnown RBP2.71□□□□□ -1.98
TRAV28-201ENST00000557548 CCNA1P78396 465 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 RBBP4Q09028 425 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 PJVKQ0ZLH3 352 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 CUL2Q13617 745 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 SELPLGQ14242 412 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 SLC17A1Q14916 467 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 PDK3Q15120 406 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 CDKN3Q16667 212 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 ACCSLQ4AC99 568 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 LINC01620Q4KN68 170 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 FILIP1LQ4L180 1135 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 ATF7IP2Q5U623 682 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 DMKNQ6E0U4 476 aaPredicted RBP2.71□□□□□ -1.98
TRAV28-201ENST00000557548 PYHIN1Q6K0P9 492 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 SPSB3Q6PJ21 355 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 C19orf48Q6RUI8 117 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 SLC26A9Q7LBE3 791 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 GPR142Q7Z601 462 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 VPS36Q86VN1 386 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 HOGA1Q86XE5 327 aa2.71□□□□□ -1.98
TRAV28-201ENST00000557548 OR4N5Q8IXE1 308 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms