RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 IL36AQ9UHA7 158 aa15.38■□□□□ 0.05
SHMT2-231ENST00000557433 ALG5Q9Y673 324 aa15.38■□□□□ 0.05
SHMT2-231ENST00000557433 PLPP1O14494 284 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 AKAP8O43823 692 aaKnown RBP15.37■□□□□ 0.05
SHMT2-231ENST00000557433 LILRB5O75023 590 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 CXCL10P02778 98 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 EPHX1P07099 455 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 KELP23276 732 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 PKLRP30613 574 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 NUDT1P36639 197 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 CCT3P49368 545 aaKnown RBP15.37■□□□□ 0.05
SHMT2-231ENST00000557433 MAN2A2P49641 1150 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 RRAS2P62070 204 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-231ENST00000557433 RPS26P62854 115 aaKnown RBP15.37■□□□□ 0.05
SHMT2-231ENST00000557433 FOXD4Q12950 439 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-231ENST00000557433 DSG2Q14126 1118 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 FLYWCH1Q4VC44 716 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 ARSIQ5FYB1 569 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 ASTLQ6HA08 431 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-231ENST00000557433 ACSM5Q6NUN0 579 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 ZNF765Q7L2R6 523 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 BCDIN3DQ7Z5W3 292 aaKnown RBP15.37■□□□□ 0.05
SHMT2-231ENST00000557433 TM9SF4Q92544 642 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 CREB3L1Q96BA8 519 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 AIF1LQ9BQI0 150 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 IRF2BPLQ9H1B7 796 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 MVB12BQ9H7P6 319 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 TRIM45Q9H8W5 580 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-231ENST00000557433 PAK6Q9NQU5 681 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-231ENST00000557433 STMN3Q9NZ72 180 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 HELZP42694 1942 aaKnown RBP15.37■□□□□ 0.05
SHMT2-231ENST00000557433 SOD1P00441 154 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 FHP07954 510 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 PSKH1P11801 424 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 BSGP35613 385 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 HSD17B2P37059 387 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 INPP1P49441 399 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 KHKP50053 298 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 P2RX3P56373 397 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 HOXC5Q00444 222 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 FABP5Q01469 135 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 PIN1Q13526 163 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-231ENST00000557433 WSCD2Q2TBF2 565 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 CCNJQ5T5M9 372 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 UTS2BQ765I0 119 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 ADIPOR2Q86V24 386 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 RBM45Q8IUH3 476 aaKnown RBP15.37■□□□□ 0.05
SHMT2-231ENST00000557433 ADGRF3Q8IZF5 1079 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 CELF5Q8N6W0 485 aaKnown RBP15.37■□□□□ 0.05
SHMT2-231ENST00000557433 POGLUT1Q8NBL1 392 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 ZNF485Q8NCK3 441 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 RAB8BQ92930 207 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 RAD51AP1Q96B01 352 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 SLC35G5Q96KT7 338 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 ATF6BQ99941 703 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 JAM3Q9BX67 310 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 MS4A8Q9BY19 250 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 ZNF717Q9BY31 904 aaPredicted RBP15.37■□□□□ 0.05
SHMT2-231ENST00000557433 BTBD1Q9H0C5 482 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 ANKRD19PQ9H560 264 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 MED17Q9NVC6 651 aa15.37■□□□□ 0.05
SHMT2-231ENST00000557433 PRR23AA6NEV1 266 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 UBXN7O94888 489 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 NR2F1P10589 423 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 APEX1P27695 318 aaKnown RBP15.36■□□□□ 0.05
SHMT2-231ENST00000557433 ACADLP28330 430 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 HTR2BP41595 481 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 MEF2AQ02078 507 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-231ENST00000557433 MRPL28Q13084 256 aaKnown RBP15.36■□□□□ 0.05
SHMT2-231ENST00000557433 ADAM15Q13444 863 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 ARHGAP19Q14CB8 494 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 KIAA0907Q7Z7F0 614 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-231ENST00000557433 IQCHQ86VS3 1027 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 C17orf64Q86WR6 236 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 NUDT13Q86X67 352 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 ANKK1Q8NFD2 765 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 OR52N1Q8NH53 320 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 DEDD2Q8WXF8 326 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 GATAD2BQ8WXI9 593 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 SMG7Q92540 1137 aaKnown RBP15.36■□□□□ 0.05
SHMT2-231ENST00000557433 OTULINQ96BN8 352 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 DTD2Q96FN9 168 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 HYLS1Q96M11 299 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 UBL7Q96S82 380 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-231ENST00000557433 RSPO3Q9BXY4 272 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-231ENST00000557433 PCBD2Q9H0N5 130 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 FOLH1BQ9HBA9 442 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 MAN2C1Q9NTJ4 1040 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 COMMD3Q9UBI1 195 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 UTRNP46939 3433 aa15.36■□□□□ 0.05
SHMT2-231ENST00000557433 DENND4CQ5VZ89 1909 aa15.35■□□□□ 0.05
SHMT2-231ENST00000557433 PCNTO95613 3336 aa15.35■□□□□ 0.05
SHMT2-231ENST00000557433 CPNE3O75131 537 aaKnown RBP15.35■□□□□ 0.05
SHMT2-231ENST00000557433 FGBP02675 491 aa15.35■□□□□ 0.05
SHMT2-231ENST00000557433 LRG1P02750 347 aa15.35■□□□□ 0.05
SHMT2-231ENST00000557433 LIMS3P0CW19 117 aa15.35■□□□□ 0.05
SHMT2-231ENST00000557433 LIMS4P0CW20 117 aa15.35■□□□□ 0.05
SHMT2-231ENST00000557433 DRD2P14416 443 aa15.35■□□□□ 0.05
SHMT2-231ENST00000557433 HOXD10P28358 340 aa15.35■□□□□ 0.05
SHMT2-231ENST00000557433 BDH1Q02338 343 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms