RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 TBX19O60806 448 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 ATP6AP2O75787 350 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 CBX7O95931 251 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 FBXO45P0C2W1 286 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 PRPS2P11908 318 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 BCKDHAP12694 445 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 PCSK2P16519 638 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 CNR1P21554 472 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 GPX3P22352 226 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 HPCAL1P37235 193 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 NCBP2P52298 156 aaKnown RBP eCLIP11.53□□□□□ -0.567e-14■■■□□ 15.3
SLIRP-209ENST00000557342 RPP38P78345 283 aaKnown RBP11.53□□□□□ -0.56
SLIRP-209ENST00000557342 BST1Q10588 318 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 EXOSC7Q15024 291 aaKnown RBP11.53□□□□□ -0.56
SLIRP-209ENST00000557342 PDCD2Q16342 344 aaPredicted RBP11.53□□□□□ -0.56
SLIRP-209ENST00000557342 ZNF791Q3KP31 576 aaPredicted RBP11.53□□□□□ -0.56
SLIRP-209ENST00000557342 TRMT12Q53H54 448 aaKnown RBP11.53□□□□□ -0.56
SLIRP-209ENST00000557342 KRTCAP3Q53RY4 240 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 C6orf136Q5SQH8 315 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 SLC22A10Q63ZE4 541 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 LYPD8Q6UX82 237 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 FNDC5Q8NAU1 212 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 PRR7Q8TB68 274 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 PPCDCQ96CD2 204 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 HSPBAP1Q96EW2 488 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 ATP6V1G3Q96LB4 118 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 C3orf30Q96M34 536 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 TSSK3Q96PN8 268 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 SORT1Q99523 831 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 ZNF395Q9H8N7 513 aaPredicted RBP11.53□□□□□ -0.56
SLIRP-209ENST00000557342 THAP1Q9NVV9 213 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 SEC14L3Q9UDX4 400 aa11.53□□□□□ -0.56
SLIRP-209ENST00000557342 EXO1Q9UQ84 846 aaKnown RBP11.53□□□□□ -0.56
SLIRP-209ENST00000557342 EIF3LQ9Y262 564 aaKnown RBP11.53□□□□□ -0.56
SLIRP-209ENST00000557342 SPENQ96T58 3664 aaKnown RBP11.53□□□□□ -0.56
SLIRP-209ENST00000557342 SVILO95425 2214 aa11.52□□□□□ -0.56
SLIRP-209ENST00000557342 A0A087WV62 115 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 PLOD2O00469 737 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 TP53I11O14683 189 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 ACOX3O15254 700 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 AKAP10O43572 662 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 PLOD3O60568 738 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 COQ9O75208 318 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 LRATO95237 230 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 JUNP05412 331 aaKnown RBP11.52□□□□□ -0.57
SLIRP-209ENST00000557342 IFI6P09912 130 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 ZNF24P17028 368 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 DRD5P21918 477 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 MST1P26927 711 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 PTGER1P34995 402 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 PPICP45877 212 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 PSPHP78330 225 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 MRPS35P82673 323 aaKnown RBP11.52□□□□□ -0.57
SLIRP-209ENST00000557342 EMX2Q04743 252 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 SRSF11Q05519 484 aaKnown RBP11.52□□□□□ -0.57
SLIRP-209ENST00000557342 RBPJQ06330 500 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 NTRK2Q16620 822 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 EIF2S3LQ2VIR3 472 aaKnown RBP11.52□□□□□ -0.57
SLIRP-209ENST00000557342 IL23RQ5VWK5 629 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 GFRALQ6UXV0 394 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 BNC2Q6ZN30 1099 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-209ENST00000557342 RGS9BPQ6ZS82 235 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 GK5Q6ZS86 529 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 LRRC34Q8IZ02 419 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 LIX1Q8N485 282 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 FAM26EQ8N5C1 309 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 CPSF7Q8N684 471 aaKnown RBP11.52□□□□□ -0.57
SLIRP-209ENST00000557342 ZFP62Q8NB50 900 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-209ENST00000557342 ZFP28Q8NHY6 868 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 KAT2AQ92830 837 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 GFM2Q969S9 779 aaKnown RBP11.52□□□□□ -0.57
SLIRP-209ENST00000557342 ARL8AQ96BM9 186 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 ZBED6CLQ96FA7 236 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-209ENST00000557342 LCORQ96JN0 433 aaPredicted RBP11.52□□□□□ -0.57
SLIRP-209ENST00000557342 GPR137Q96N19 417 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 FAM173AQ9BQD7 235 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 GLIPR2Q9H4G4 154 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 MANSC1Q9H8J5 431 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 TAS2R9Q9NYW1 312 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 NOP53Q9NZM5 478 aaKnown RBP11.52□□□□□ -0.57
SLIRP-209ENST00000557342 CNIH4Q9P003 139 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 SH3BP4Q9P0V3 963 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 BAIAP2L1Q9UHR4 511 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 MAPRE3Q9UPY8 281 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 NPFFR2Q9Y5X5 522 aa11.52□□□□□ -0.57
SLIRP-209ENST00000557342 NINQ8N4C6 2090 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 HMGB1P1B2RPK0 211 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-209ENST00000557342 NPIPA5E9PKD4 350 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 SLCO1B7G3V0H7 640 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 ACOT7O00154 380 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 TFECO14948 347 aaPredicted RBP11.51□□□□□ -0.57
SLIRP-209ENST00000557342 PDPK1O15530 556 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 ATP8B1O43520 1251 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 NAGAP17050 411 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 SOX18P35713 384 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 EMDP50402 254 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 GPR85P60893 370 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 PLGLB1Q02325 96 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 DUSP8Q13202 625 aa11.51□□□□□ -0.57
SLIRP-209ENST00000557342 PDE7AQ13946 482 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms