RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 FAM114A1Q8IWE2 563 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 OR2AP1Q8NGE2 309 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 OR52K2Q8NGK3 314 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 WDR20Q8TBZ3 569 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 KIAA1524Q8TCG1 905 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 PGAP3Q96FM1 320 aaPredicted RBP4.64□□□□□ -1.67
HIF1A-209ENST00000556827 ZNF354BQ96LW1 612 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 C17orf77Q96MU5 243 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 PSMB7Q99436 277 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 TM6SF2Q9BZW4 377 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 TFB2MQ9H5Q4 396 aaKnown RBP4.64□□□□□ -1.67
HIF1A-209ENST00000556827 PELI2Q9HAT8 420 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 PISDQ9UG56 409 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 OR12D3Q9UGF7 316 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 AMACRQ9UHK6 382 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 ZNF148Q9UQR1 794 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 U3KQA8 63 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 CACNA1EQ15878 2313 aa4.64□□□□□ -1.67
HIF1A-209ENST00000556827 NBEAQ8NFP9 2946 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 IGLV3-10A0A075B6K4 115 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 PRSS51A0A1B0GVH4 220 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 GTPBP10A4D1E9 387 aaKnown RBP4.63□□□□□ -1.67
HIF1A-209ENST00000556827 D6RAR5 112 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 GOLGA8SH3BPF8 625 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 CACNB4O00305 520 aaPredicted RBP4.63□□□□□ -1.67
HIF1A-209ENST00000556827 RAD51BO15315 384 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 LSM8O95777 96 aaKnown RBP4.63□□□□□ -1.67
HIF1A-209ENST00000556827 IGSF6O95976 241 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 UGT2B4P06133 528 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 TPM2P07951 284 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 ACP2P11117 423 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 ZNF23P17027 643 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 CD82P27701 267 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 SDC4P31431 198 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 GABRA5P31644 462 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 HOXA1P49639 335 aaPredicted RBP4.63□□□□□ -1.67
HIF1A-209ENST00000556827 RHOAP61586 193 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 POLR2LP62875 67 aaKnown RBP4.63□□□□□ -1.67
HIF1A-209ENST00000556827 PHEXP78562 749 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 CCL7P80098 99 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 BECN1Q14457 450 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 KLHL40Q2TBA0 621 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 CEP85LQ5SZL2 805 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 ENPP7Q6UWV6 458 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 FAM131BQ86XD5 332 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 Q8N9G6 341 aaPredicted RBP4.63□□□□□ -1.67
HIF1A-209ENST00000556827 OR6K2Q8NGY2 324 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 HCAR2Q8TDS4 363 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 SMPDL3BQ92485 455 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 SHC3Q92529 594 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 KIAA1143Q96AT1 154 aaPredicted RBP4.63□□□□□ -1.67
HIF1A-209ENST00000556827 CENPTQ96BT3 561 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 NPY6RQ99463 290 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 KLF6Q99612 283 aaPredicted RBP4.63□□□□□ -1.67
HIF1A-209ENST00000556827 CENPOQ9BU64 300 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 WRAP53Q9BUR4 548 aaKnown RBP4.63□□□□□ -1.67
HIF1A-209ENST00000556827 LRRC61Q9BV99 259 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 EDEM3Q9BZQ6 932 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 TRIM4Q9C037 500 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 ADNPQ9H2P0 1102 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 LRRN3Q9H3W5 708 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 KCNK15Q9H427 330 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 DPEP2Q9H4A9 486 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 OSGEPL1Q9H4B0 414 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 ACP6Q9NPH0 428 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 STARD5Q9NSY2 213 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 NPAP1Q9NZP6 1156 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.63□□□□□ -1.67
HIF1A-209ENST00000556827 RHCGQ9UBD6 479 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 MOSPD1Q9UJG1 213 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 DNAJC12Q9UKB3 198 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 MAN1B1Q9UKM7 699 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 JRKLQ9Y4A0 524 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 SNX8Q9Y5X2 465 aa4.63□□□□□ -1.67
HIF1A-209ENST00000556827 LOC102723996A0A087X1L8 192 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 FAM172BPA6NC97 362 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 C15orf62A8K5M9 175 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 KDELR3O43731 214 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 NUDT21O43809 227 aaKnown RBP4.62□□□□□ -1.67
HIF1A-209ENST00000556827 ZNF821O75541 412 aaPredicted RBP4.62□□□□□ -1.67
HIF1A-209ENST00000556827 ZMPSTE24O75844 475 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 CPNE6O95741 557 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 PLEKP08567 350 aaPredicted RBP4.62□□□□□ -1.67
HIF1A-209ENST00000556827 MSH3P20585 1137 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 ALDH4A1P30038 563 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 CSTF2P33240 577 aaKnown RBP eCLIP4.62□□□□□ -1.67
HIF1A-209ENST00000556827 CCR10P46092 362 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 YBEYP58557 167 aaPredicted RBP4.62□□□□□ -1.67
HIF1A-209ENST00000556827 GAGE2BQ13066 116 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 GAGE5Q13069 117 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 GAGE6Q13070 117 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 PLA2G7Q13093 441 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 RBM39Q14498 530 aaKnown RBP4.62□□□□□ -1.67
HIF1A-209ENST00000556827 SYCP1Q15431 976 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 TGIF1Q15583 401 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 NTRK2Q16620 822 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 CDO1Q16878 200 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 PTPN20Q4JDL3 420 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 TMEM52BQ4KMG9 183 aa4.62□□□□□ -1.67
HIF1A-209ENST00000556827 GAGE2EQ4V326 116 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms