RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 DUX3Q96PT4 197 aa3.67□□□□□ -1.82
PRPF39-210ENST00000556718 ACCSQ96QU6 501 aa3.67□□□□□ -1.82
PRPF39-210ENST00000556718 ZNF300Q96RE9 604 aaPredicted RBP3.67□□□□□ -1.82
PRPF39-210ENST00000556718 MYCBPQ99417 103 aaPredicted RBP3.67□□□□□ -1.82
PRPF39-210ENST00000556718 PALMDQ9NP74 551 aa3.67□□□□□ -1.82
PRPF39-210ENST00000556718 PLCXD1Q9NUJ7 323 aa3.67□□□□□ -1.82
PRPF39-210ENST00000556718 P2RX2Q9UBL9 471 aa3.67□□□□□ -1.82
PRPF39-210ENST00000556718 EIF3KQ9UBQ5 218 aaKnown RBP3.67□□□□□ -1.82
PRPF39-210ENST00000556718 TBK1Q9UHD2 729 aa3.67□□□□□ -1.82
PRPF39-210ENST00000556718 IKBKGQ9Y6K9 419 aa3.67□□□□□ -1.82
PRPF39-210ENST00000556718 PTPRUQ92729 1446 aa3.67□□□□□ -1.82
PRPF39-210ENST00000556718 MAPK8IP3Q9UPT6 1336 aa3.67□□□□□ -1.82
PRPF39-210ENST00000556718 TP53BP1Q12888 1972 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-210ENST00000556718 SYNJ2BP-COX16A0A087WUM0 186 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 A0A0U1RQV5 110 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 A0A1B0GUL7 405 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 GLTPD2A6NH11 291 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 GPR89AB7ZAQ6 455 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 H3BTX0 84 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 K7EQD1 137 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 TRAFD1O14545 582 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-210ENST00000556718 APBB3O95704 486 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 TPM3P06753 285 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 FHP07954 510 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 ANXA4P09525 319 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-210ENST00000556718 SLC35G4P0C7Q5 338 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 GPR89BP0CG08 455 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 ZNF883P0CG24 379 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 ADORA3P0DMS8 318 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 EDNRAP25101 427 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 CALML3P27482 149 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 ADRA1AP35348 466 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 ID1P41134 155 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 SSR1P43307 286 aaKnown RBP3.66□□□□□ -1.82
PRPF39-210ENST00000556718 SLC1A6P48664 564 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 NDST2P52849 883 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 PEX3P56589 373 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 GNB1P62873 340 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 NUCB2P80303 420 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 BNIP1Q12981 228 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 NFATC2Q13469 925 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 SLC17A1Q14916 467 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 ZSWIM7Q19AV6 140 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 ADPRMQ3LIE5 342 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 SLC36A3Q495N2 470 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 ACSF3Q4G176 576 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-210ENST00000556718 LRRC23Q53EV4 343 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-210ENST00000556718 HSP90AB3PQ58FF7 597 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 ZNF311Q5JNZ3 666 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 TCHHL1Q5QJ38 904 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-210ENST00000556718 ADAMTSL4-AS1Q5T5F5 129 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 ATAD3BQ5T9A4 648 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 SULT1C3Q6IMI6 304 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 BHLHB9Q6PI77 547 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 CATSPERDQ86XM0 798 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 CENPSQ8N2Z9 138 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 FADS6Q8N9I5 356 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 WDSUB1Q8N9V3 476 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 ZNF397Q8NF99 534 aaPredicted RBP3.66□□□□□ -1.82
PRPF39-210ENST00000556718 ZNF519Q8TB69 540 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 HCAR2Q8TDS4 363 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 SLCO2A1Q92959 643 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 CCDC51Q96ER9 411 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 VPS35Q96QK1 796 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 OVOL2Q9BRP0 275 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 FOXJ3Q9UPW0 622 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 MRPS7Q9Y2R9 242 aaKnown RBP3.66□□□□□ -1.82
PRPF39-210ENST00000556718 MRPS18CQ9Y3D5 142 aaKnown RBP3.66□□□□□ -1.82
PRPF39-210ENST00000556718 SETD5Q9C0A6 1442 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 ATAD2BQ9ULI0 1458 aa3.66□□□□□ -1.82
PRPF39-210ENST00000556718 CCDC144AA2RUR9 1427 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 FHAD1B1AJZ9 1412 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 LOC105371242A0A075B767 164 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 VGLL3A8MV65 326 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 WASH3PC4AMC7 463 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 EI24O14681 340 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 TFECO14948 347 aaPredicted RBP3.65□□□□□ -1.83
PRPF39-210ENST00000556718 DUSP11O75319 330 aaKnown RBP3.65□□□□□ -1.83
PRPF39-210ENST00000556718 STK17BO94768 372 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 RHOBTB1O94844 696 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 CLDN1O95832 211 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 IGLV1-44P01699 117 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 AMBPP02760 352 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 CSF2P04141 144 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 HNRNPA2B1P22626 353 aaKnown RBP3.65□□□□□ -1.83
PRPF39-210ENST00000556718 HTR2AP28223 471 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 PTGFRP43088 359 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 MTIF2P46199 727 aaKnown RBP3.65□□□□□ -1.83
PRPF39-210ENST00000556718 GTF2A1P52655 376 aaPredicted RBP3.65□□□□□ -1.83
PRPF39-210ENST00000556718 OSTNP61366 133 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 PPIAP62937 165 aaKnown RBP3.65□□□□□ -1.83
PRPF39-210ENST00000556718 GSTO1P78417 241 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 CBX1P83916 185 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 IL9RQ01113 521 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 FUT7Q11130 342 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 FASTKQ14296 549 aaKnown RBP3.65□□□□□ -1.83
PRPF39-210ENST00000556718 EMC2Q15006 297 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 MLF2Q15773 248 aaPredicted RBP3.65□□□□□ -1.83
PRPF39-210ENST00000556718 UPP1Q16831 310 aa3.65□□□□□ -1.83
PRPF39-210ENST00000556718 NEPROQ6NW34 567 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms