RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 ZSWIM3Q96MP5 696 aa8.13□□□□□ -1.11
MARK3-210ENST00000556463 TSSK3Q96PN8 268 aa8.13□□□□□ -1.11
MARK3-210ENST00000556463 GSDMCQ9BYG8 508 aa8.13□□□□□ -1.11
MARK3-210ENST00000556463 TLR8Q9NR97 1041 aaKnown RBP8.13□□□□□ -1.11
MARK3-210ENST00000556463 ST3GAL5Q9UNP4 418 aa8.13□□□□□ -1.11
MARK3-210ENST00000556463 SF3B6Q9Y3B4 125 aaKnown RBP8.13□□□□□ -1.11
MARK3-210ENST00000556463 OR10H1Q9Y4A9 318 aa8.13□□□□□ -1.11
MARK3-210ENST00000556463 VWA8A3KMH1 1905 aa8.13□□□□□ -1.11
MARK3-210ENST00000556463 E9PI62 339 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 TLR5O60602 858 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 GUCA1CO95843 209 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 DHFRP00374 187 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 CTNNB1P35222 781 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 TNFRSF17Q02223 184 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.12□□□□□ -1.11
MARK3-210ENST00000556463 PRAMEF19Q5SWL8 479 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 C12orf73Q69YU5 71 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 DEF8Q6ZN54 512 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 RTL4Q6ZR62 310 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 KRT78Q8N1N4 520 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 C9orf62Q8N4C0 152 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 CLRN3Q8NCR9 226 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 PROKR2Q8NFJ6 384 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 RPRD1AQ96P16 312 aaPredicted RBP8.12□□□□□ -1.11
MARK3-210ENST00000556463 PANX1Q96RD7 426 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 BOCQ9BWV1 1114 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 BIN3Q9NQY0 253 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 MAPRE3Q9UPY8 281 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 CORO2BQ9UQ03 480 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 DISC1C4P0D8 188 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 GREM1O60565 184 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 HCN1O60741 890 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 EGFP01133 1207 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 RAF1P04049 648 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 HEXBP07686 556 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 CBSLP0DN79 551 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 ARSBP15848 533 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 CPEP16870 476 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 IGFBP4P22692 258 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 PTAFRP25105 342 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 CBSP35520 551 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 SOX3P41225 446 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 GPR15P49685 360 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 CRB2Q5IJ48 1285 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 FRMPD2BQ6IN97 320 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 MTFR2Q6P444 385 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 THNSL2Q86YJ6 484 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 THEM5Q8N1Q8 247 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 STPG2Q8N412 459 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 ATAD1Q8NBU5 361 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 WDR20Q8TBZ3 569 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 LRRC46Q96FV0 321 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 C12orf66Q96MD2 445 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 TSNAXQ99598 290 aaKnown RBP8.12□□□□□ -1.11
MARK3-210ENST00000556463 BPIFA1Q9NP55 256 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 SARS2Q9NP81 518 aaKnown RBP8.12□□□□□ -1.11
MARK3-210ENST00000556463 ZNF275Q9NSD4 429 aaPredicted RBP8.12□□□□□ -1.11
MARK3-210ENST00000556463 RBFOX1Q9NWB1 397 aaKnown RBP8.12□□□□□ -1.11
MARK3-210ENST00000556463 WWOXQ9NZC7 414 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 FZD4Q9ULV1 537 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 NOSIPQ9Y314 301 aaKnown RBP8.12□□□□□ -1.11
MARK3-210ENST00000556463 FRMPD3Q5JV73 1810 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 UTRNP46939 3433 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 OR6C74A6NCV1 312 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 BET1O15155 118 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 SMAD9O15198 467 aaKnown RBP8.12□□□□□ -1.11
MARK3-210ENST00000556463 B3GAT3O94766 335 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 CCNB2O95067 398 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 CFDP00746 253 aaPredicted RBP8.12□□□□□ -1.11
MARK3-210ENST00000556463 RGS4P49798 205 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 PCBP3P57721 371 aaKnown RBP8.12□□□□□ -1.11
MARK3-210ENST00000556463 RRAS2P62070 204 aaPredicted RBP8.12□□□□□ -1.11
MARK3-210ENST00000556463 RAE1P78406 368 aaKnown RBP8.12□□□□□ -1.11
MARK3-210ENST00000556463 EFEMP1Q12805 493 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 GAB1Q13480 694 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 VASNQ6EMK4 673 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 CD200R1LQ6Q8B3 271 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 NLRC3Q7RTR2 1065 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 CLECL1Q8IZS7 167 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 LGI4Q8N135 537 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 ZBTB2Q8N680 514 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.12□□□□□ -1.116e-7■■■□□ 15.8
MARK3-210ENST00000556463 ZBED6CLQ96FA7 236 aaPredicted RBP8.12□□□□□ -1.11
MARK3-210ENST00000556463 EXOC2Q96KP1 924 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 CXorf58Q96LI9 332 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 MAP3K3Q99759 626 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 TREX2Q9BQ50 279 aaPredicted RBP8.12□□□□□ -1.11
MARK3-210ENST00000556463 FUZQ9BT04 418 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 CINPQ9BW66 212 aaPredicted RBP8.12□□□□□ -1.11
MARK3-210ENST00000556463 ADGRE3Q9BY15 652 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 GSX2Q9BZM3 304 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 TMEM38AQ9H6F2 299 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 CLEC2DQ9UHP7 191 aa8.12□□□□□ -1.11
MARK3-210ENST00000556463 hCG_1807616A0A1W2PRN6 198 aa8.11□□□□□ -1.11
MARK3-210ENST00000556463 ST8SIA5O15466 376 aa8.11□□□□□ -1.11
MARK3-210ENST00000556463 SLC43A1O75387 559 aa8.11□□□□□ -1.11
MARK3-210ENST00000556463 POP7O75817 140 aaKnown RBP8.11□□□□□ -1.11
MARK3-210ENST00000556463 HK1P19367 917 aa8.11□□□□□ -1.11
MARK3-210ENST00000556463 DRD5P21918 477 aa8.11□□□□□ -1.11
MARK3-210ENST00000556463 PPIBP23284 216 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms