RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ATG16L1Q676U5 607 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 ZNF324BQ6AW86 544 aaPredicted RBP8.93□□□□□ -0.98
SRP54-210ENST00000556380 LYPD4Q6UWN0 246 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 LARP4Q71RC2 724 aaKnown RBP eCLIP8.93□□□□□ -0.98
SRP54-210ENST00000556380 RIMKLAQ8IXN7 391 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 SAMD14Q8IZD0 417 aaPredicted RBP8.93□□□□□ -0.98
SRP54-210ENST00000556380 LRRC25Q8N386 305 aaPredicted RBP8.93□□□□□ -0.98
SRP54-210ENST00000556380 CISD2Q8N5K1 135 aaKnown RBP8.93□□□□□ -0.98
SRP54-210ENST00000556380 ADCY4Q8NFM4 1077 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 OR7G1Q8NGA0 311 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 OR9A2Q8NGT5 310 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 NUDT8Q8WV74 236 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 ADIPOR1Q96A54 375 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 MIB2Q96AX9 1013 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 TUBGCP3Q96CW5 907 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 AMDHD1Q96NU7 426 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 TSSK3Q96PN8 268 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 TAAR6Q96RI8 345 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 RASL10BQ96S79 203 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 CNPPD1Q9BV87 410 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 HES7Q9BYE0 225 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 WWTR1Q9GZV5 400 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.93□□□□□ -0.98
SRP54-210ENST00000556380 REEP4Q9H6H4 257 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 MEAF6Q9HAF1 191 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 SLAMF7Q9NQ25 335 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 PFDN4Q9NQP4 134 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 ANKRD10Q9NXR5 420 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 ASIC5Q9NY37 505 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 LRFN1Q9P244 771 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 ABI3Q9P2A4 366 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 ATP6V1HQ9UI12 483 aa8.93□□□□□ -0.98
SRP54-210ENST00000556380 FLNBO75369 2602 aaKnown RBP8.93□□□□□ -0.98
SRP54-210ENST00000556380 SDHDO14521 159 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 FCHO1O14526 889 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 HDAC3O15379 428 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 AKAP10O43572 662 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 PLOD3O60568 738 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 OR6B1O95007 311 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 LRATO95237 230 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 UQCRHP07919 91 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 SP1P08047 785 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 PRPS2P11908 318 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 PCSK2P16519 638 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 MPIP34949 423 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 FRKP42685 505 aaPredicted RBP8.92□□□□□ -0.98
SRP54-210ENST00000556380 ASMTP46597 345 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 CYB561P49447 251 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 EMDP50402 254 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 SSR4P51571 173 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 C21orf58P58505 322 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 PPP2R2AP63151 447 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 MRPS35P82673 323 aaKnown RBP8.92□□□□□ -0.98
SRP54-210ENST00000556380 PTGR1Q14914 329 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 EXOSC7Q15024 291 aaKnown RBP8.92□□□□□ -0.98
SRP54-210ENST00000556380 IGFBP7Q16270 282 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 ZNF791Q3KP31 576 aaPredicted RBP8.92□□□□□ -0.98
SRP54-210ENST00000556380 ZNF766Q5HY98 468 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 IL23RQ5VWK5 629 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 SLC25A25Q6KCM7 469 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 ANKRD26P1Q6NSI1 321 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 RNF111Q6ZNA4 994 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 MAVSQ7Z434 540 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 MDGA2Q7Z553 956 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 WDR75Q8IWA0 830 aaKnown RBP8.92□□□□□ -0.98
SRP54-210ENST00000556380 GPALPP1Q8IXQ4 340 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 LRRC34Q8IZ02 419 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 LIX1Q8N485 282 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 SLC15A4Q8N697 577 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 CLHC1Q8NHS4 586 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 C16orf52Q8NHV5 167 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 CDC26Q8NHZ8 85 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 CPT1CQ8TCG5 803 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 KAT2AQ92830 837 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 GFM2Q969S9 779 aaKnown RBP8.92□□□□□ -0.98
SRP54-210ENST00000556380 TP53INP1Q96A56 240 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 ERP27Q96DN0 273 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 MTERF3Q96E29 417 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 BBS4Q96RK4 519 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 C1orf50Q9BV19 199 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 NUF2Q9BZD4 464 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 OR10A5Q9H207 317 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 GLIPR2Q9H4G4 154 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 SH2D2AQ9NP31 389 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 ASF1BQ9NVP2 202 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.92□□□□□ -0.98
SRP54-210ENST00000556380 DTX4Q9Y2E6 619 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 SVILO95425 2214 aa8.92□□□□□ -0.98
SRP54-210ENST00000556380 A0A087WV62 115 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 UQCRHLA0A096LP55 91 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 ASPDHA6ND91 283 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 J3QKU1 62 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 PLOD2O00469 737 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 ANKRD28O15084 1053 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 NME2P1O60361 137 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 IFI6P09912 130 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 LAMP1P11279 417 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 G6PDP11413 515 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 GPX3P22352 226 aa8.91□□□□□ -0.98
SRP54-210ENST00000556380 NME2P22392 152 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms