RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 TUBB1Q9H4B7 451 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 LRTM1Q9HBL6 345 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 PFDN4Q9NQP4 134 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 DEPPQ9NTK1 212 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 C1orf109Q9NX04 203 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 ZNF639Q9UID6 485 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 CFL2Q9Y281 166 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 POLR3HQ9Y535 204 aaPredicted RBP10.65□□□□□ -0.7
SLIRP-205ENST00000556310 DNAJC15Q9Y5T4 150 aa10.65□□□□□ -0.7
SLIRP-205ENST00000556310 A0A0G2JMM0 328 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 A0A1W2PPB8 328 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 A0A1W2PRS3 328 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 KIR3DP1A8MWS1 328 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 TMEM233B4DJY2 109 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 NPIPA5E9PKD4 350 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 TFECO14948 347 aaPredicted RBP10.64□□□□□ -0.71
SLIRP-205ENST00000556310 LDLRP01130 860 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 CCL3P10147 92 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 GPX3P22352 226 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 ARRB2P32121 409 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 PTGER1P34995 402 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 SOX18P35713 384 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 KIAA0040Q15053 153 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 LTB4RQ15722 352 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 ZNF628Q5EBL2 1059 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 RNFT1Q5M7Z0 435 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 SH2D4BQ5SQS7 431 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 HLA-DQA1Q5Y7H0 255 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 FAM71E1Q6IPT2 247 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 FAM180BQ6P0A1 224 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 FAM111BQ6SJ93 734 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 BNC2Q6ZN30 1099 aaPredicted RBP10.64□□□□□ -0.71
SLIRP-205ENST00000556310 GK5Q6ZS86 529 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 Q6ZSR9 355 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 DDIASQ8IXT1 998 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 ADCY4Q8NFM4 1077 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 OR2M7Q8NG81 312 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 OR2T11Q8NH01 316 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 C16orf52Q8NHV5 167 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 ADIPOR1Q96A54 375 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 ERP27Q96DN0 273 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 PKNOX2Q96KN3 472 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 CCT7Q99832 543 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 STMN4Q9H169 189 aaPredicted RBP10.64□□□□□ -0.71
SLIRP-205ENST00000556310 SH2D2AQ9NP31 389 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 MIEF1Q9NQG6 463 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 SLC35C2Q9NQQ7 365 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 SACM1LQ9NTJ5 587 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 NPIPA1Q9UND3 350 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 TMED5Q9Y3A6 229 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 TRAF6Q9Y4K3 522 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 GTF3C1Q12789 2109 aa10.64□□□□□ -0.71
SLIRP-205ENST00000556310 A0A1B0GUH1 482 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 CAPN14A8MX76 684 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 ACOT7O00154 380 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 PIP5K1BO14986 540 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 LSM1O15116 133 aaKnown RBP10.63□□□□□ -0.71
SLIRP-205ENST00000556310 BIRC5O15392 142 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 ASNA1O43681 348 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 SLC19A2O60779 497 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 SEC22BO75396 215 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 WISP2O76076 250 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 ZWINTO95229 277 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 CBX7O95931 251 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 P04436 131 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 SERPINE1P05121 402 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 LINC00032P0C843 101 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 DHRS4L1P0CG22 281 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 RNF224P0DH78 156 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 PCSK2P16519 638 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 RFC3P40938 356 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 TMED10P49755 219 aaKnown RBP10.63□□□□□ -0.71
SLIRP-205ENST00000556310 NR0B1P51843 470 aaKnown RBP10.63□□□□□ -0.71
SLIRP-205ENST00000556310 PER3P56645 1201 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 NRG3P56975 720 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 RPL38P63173 70 aaKnown RBP10.63□□□□□ -0.71
SLIRP-205ENST00000556310 MRPS35P82673 323 aaKnown RBP10.63□□□□□ -0.71
SLIRP-205ENST00000556310 C2orf80Q0P641 193 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 DUSP8Q13202 625 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 EXOSC7Q15024 291 aaKnown RBP10.63□□□□□ -0.71
SLIRP-205ENST00000556310 RPS6KA2Q15349 733 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 NTRK2Q16620 822 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 UGT3A2Q3SY77 523 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 XKR7Q5GH72 579 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 BEND6Q5SZJ8 279 aaPredicted RBP10.63□□□□□ -0.71
SLIRP-205ENST00000556310 TICAM1Q8IUC6 712 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 NUDCD3Q8IVD9 361 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 FAM9CQ8IZT9 166 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 GHDCQ8N2G8 530 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 FBXW8Q8N3Y1 598 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 OR9A2Q8NGT5 310 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 PPP1R14CQ8TAE6 165 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 AGR3Q8TD06 166 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 PAQR8Q8TEZ7 354 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 ZNF764Q96H86 408 aaPredicted RBP10.63□□□□□ -0.71
SLIRP-205ENST00000556310 MAGED4Q96JG8 741 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 PSMG3-AS1Q96PY0 264 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 FAM173AQ9BQD7 235 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 TAS2R7Q9NYW3 318 aa10.63□□□□□ -0.71
SLIRP-205ENST00000556310 PRODH2Q9UF12 536 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms