RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 NPIPA7E9PJI5 369 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 TSC22D2O75157 780 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 ADH1BP00325 375 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 NPIPA8P0DM63 369 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 NAT1P18440 290 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 CELP19835 753 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 MRPL19P49406 292 aaKnown RBP14.04□□□□□ -0.16
NEK9-209ENST00000556170 SMSP52788 366 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 CDH11P55287 796 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 C22orf42Q6IC83 251 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 SLC30A6Q6NXT4 461 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 FAM92BQ6ZTR7 304 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 OR8J1Q8NGP2 316 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 C9orf43Q8TAL5 461 aaPredicted RBP14.04□□□□□ -0.16
NEK9-209ENST00000556170 UCN3Q969E3 161 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 CRELD1Q96HD1 420 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 CENPOQ9BU64 300 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 STARD5Q9NSY2 213 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 SERGEFQ9UGK8 458 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 IFT52Q9Y366 437 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 SPEF1Q9Y4P9 236 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 VWA8A3KMH1 1905 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 B4DGG1 531 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 CTDSP2O14595 271 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 SCN2BO60939 215 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 CCNKO75909 580 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 CDK1P06493 297 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 ALAS2P22557 587 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 GRSF1Q12849 480 aaKnown RBP eCLIP14.04□□□□□ -0.163e-7■□□□□ 8
NEK9-209ENST00000556170 ZNHIT3Q15649 155 aaPredicted RBP14.04□□□□□ -0.16
NEK9-209ENST00000556170 FBXO43Q4G163 708 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 GTF2IRD2BQ6EKJ0 949 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 GTF2IRD2Q86UP8 949 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 ZNF655Q8N720 491 aaPredicted RBP14.04□□□□□ -0.16
NEK9-209ENST00000556170 FRMD1Q8N878 549 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 AMER3Q8N944 861 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 TRIM63Q969Q1 353 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 DMRTB1Q96MA1 342 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 IFT27Q9BW83 186 aa14.04□□□□□ -0.16
NEK9-209ENST00000556170 MICAL3Q7RTP6 2002 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 B4GALT2O60909 372 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 DNAJB5O75953 348 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 BMP4P12644 408 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 OSMP13725 252 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 TUBA1BP68363 451 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 LTB4RQ15722 352 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 PODNL1Q6PEZ8 512 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 TUBA1AQ71U36 451 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 GALNT12Q8IXK2 581 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 PLPP6Q8IY26 295 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 OR51A7Q8NH64 312 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 SGPP1Q9BX95 441 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 BTBD1Q9H0C5 482 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 MMP27Q9H306 513 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 GLIPR2Q9H4G4 154 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 CCDC88CQ9P219 2028 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 FAAHO00519 579 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 CSF2P04141 144 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 FHP07954 510 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 ALOX5P09917 674 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 HIST1H1TP22492 207 aaPredicted RBP14.03□□□□□ -0.16
NEK9-209ENST00000556170 NTSR1P30989 418 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 TALDO1P37837 337 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 CXCR4P61073 352 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 SUZ12Q15022 739 aaKnown RBP14.03□□□□□ -0.16
NEK9-209ENST00000556170 BCL7AQ4VC05 210 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 ANKRD53Q8N9V6 530 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 RIPOR3Q96MK2 946 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 APOOQ9BUR5 198 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 DUSP21Q9H596 190 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 ACER3Q9NUN7 267 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 PADI2Q9Y2J8 665 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 FABP12A6NFH5 140 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 HOXC11O43248 304 aaPredicted RBP14.03□□□□□ -0.16
NEK9-209ENST00000556170 SEMA3DO95025 777 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 JUNBP17275 347 aaPredicted RBP14.03□□□□□ -0.16
NEK9-209ENST00000556170 CSNK1G2P78368 415 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 ST3GAL3Q11203 375 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 VRK2Q86Y07 508 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 OR56A1Q8NGH5 318 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 OR51G2Q8NGK0 314 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 OR52A5Q9H2C5 316 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 NKX2-4Q9H2Z4 354 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 SPHK1Q9NYA1 384 aa14.03□□□□□ -0.16
NEK9-209ENST00000556170 MKI67P46013 3256 aaKnown RBP14.02□□□□□ -0.16
NEK9-209ENST00000556170 A8MV72 311 aaPredicted RBP14.02□□□□□ -0.16
NEK9-209ENST00000556170 HTR1AP08908 422 aa14.02□□□□□ -0.16
NEK9-209ENST00000556170 PSMA3P25788 255 aa14.02□□□□□ -0.16
NEK9-209ENST00000556170 RGS6P49758 472 aa14.02□□□□□ -0.16
NEK9-209ENST00000556170 VSX2P58304 361 aaPredicted RBP14.02□□□□□ -0.16
NEK9-209ENST00000556170 CHRNEQ04844 493 aa14.02□□□□□ -0.16
NEK9-209ENST00000556170 MINDY4Q4G0A6 757 aa14.02□□□□□ -0.16
NEK9-209ENST00000556170 NATD1Q8N6N6 113 aa14.02□□□□□ -0.16
NEK9-209ENST00000556170 OR52P1PQ8NH57 321 aa14.02□□□□□ -0.16
NEK9-209ENST00000556170 RHOXF1Q8NHV9 184 aa14.02□□□□□ -0.16
NEK9-209ENST00000556170 MKRN2Q9H000 416 aaKnown RBP14.02□□□□□ -0.16
NEK9-209ENST00000556170 STMN3Q9NZ72 180 aa14.02□□□□□ -0.16
NEK9-209ENST00000556170 ERVK-11Q9UQG0 969 aa14.02□□□□□ -0.16
NEK9-209ENST00000556170 WBP11Q9Y2W2 641 aaKnown RBP14.02□□□□□ -0.16
NEK9-209ENST00000556170 PCM1Q15154 2024 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms