RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 FAM87AP0C7U9 286 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 ZNF883P0CG24 379 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 GPX2P18283 190 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 RAB6AP20340 208 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 CD27P26842 260 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 PEX2P28328 305 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 TPP2P29144 1249 aaPredicted RBP6.44□□□□□ -1.38
SLIRP-204ENST00000555890 BSGP35613 385 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 CDKN2CP42773 168 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 STXBP1P61764 594 aaKnown RBP6.44□□□□□ -1.38
SLIRP-204ENST00000555890 YBX1P67809 324 aaKnown RBP6.44□□□□□ -1.38
SLIRP-204ENST00000555890 EIF2B5Q13144 721 aaKnown RBP6.44□□□□□ -1.38
SLIRP-204ENST00000555890 MED21Q13503 144 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 PDE7AQ13946 482 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 ZIC1Q15915 447 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 GTDC1Q4AE62 458 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 TMEM177Q53S58 311 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 OR4C11Q6IEV9 310 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 ANKRD26P1Q6NSI1 321 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 TLDC1Q6P9B6 456 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 DHRS13Q6UX07 377 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 SLC36A4Q6YBV0 504 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 IQCHQ86VS3 1027 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 PARGQ86W56 976 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 CALHM3Q86XJ0 350 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 NRROSQ86YC3 692 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 RBM12BQ8IXT5 1001 aaKnown RBP6.44□□□□□ -1.38
SLIRP-204ENST00000555890 ADGRG5Q8IZF4 528 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 LILRA2Q8N149 483 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 Q8N3U1 123 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 ANKFN1Q8N957 763 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 ANKRD53Q8N9V6 530 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 AVL9Q8NBF6 648 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 MFSD9Q8NBP5 474 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 PAPD5Q8NDF8 572 aaKnown RBP6.44□□□□□ -1.38
SLIRP-204ENST00000555890 ZNF548Q8NEK5 533 aaPredicted RBP6.44□□□□□ -1.38
SLIRP-204ENST00000555890 OR4A15Q8NGL6 344 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 CCL4L1Q8NHW4 92 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 CREB3L4Q8TEY5 395 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 LRTOMTQ8WZ04 291 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 FIG4Q92562 907 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 NCLNQ969V3 563 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 MIEF2Q96C03 454 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 REXO5Q96IC2 774 aaKnown RBP6.44□□□□□ -1.38
SLIRP-204ENST00000555890 BTBD9Q96Q07 612 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 TBCDQ9BTW9 1192 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 BDH2Q9BUT1 245 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 SARGQ9BW04 601 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 YIPF2Q9BWQ6 316 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 FAIM2Q9BWQ8 316 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 SLC6A20Q9NP91 592 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 TAAR2Q9P1P5 351 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 ENTPD2Q9Y5L3 495 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 GMEB1Q9Y692 573 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 DCHS2Q6V1P9 2916 aa6.44□□□□□ -1.38
SLIRP-204ENST00000555890 SNRNP200O75643 2136 aaKnown RBP6.44□□□□□ -1.38
SLIRP-204ENST00000555890 TMEM131Q92545 1883 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 PRAMEF33A0A0G2JMD5 474 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 OR6C74A6NCV1 312 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 LRIT2A6NDA9 550 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 C2orf74A8MZ97 194 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 BTN3A3O00478 584 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 LCMT2O60294 686 aaKnown RBP6.43□□□□□ -1.38
SLIRP-204ENST00000555890 CREG1O75629 220 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 LDLRP01130 860 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 GBAP04062 536 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 CD3EP07766 207 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 ABCB1P08183 1280 aaPredicted RBP6.43□□□□□ -1.38
SLIRP-204ENST00000555890 RAP2AP10114 183 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 PF4V1P10720 104 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 UQCRBP14927 111 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 HOXB9P17482 250 aaPredicted RBP6.43□□□□□ -1.38
SLIRP-204ENST00000555890 IL1RNP18510 177 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 DDCP20711 480 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 CD38P28907 300 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 PTPN6P29350 595 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 SSR2P43308 183 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 TSFMP43897 325 aaKnown RBP6.43□□□□□ -1.38
SLIRP-204ENST00000555890 GZMMP51124 257 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 MECP2P51608 486 aaKnown RBP6.43□□□□□ -1.38
SLIRP-204ENST00000555890 RPS15AP62244 130 aaKnown RBP6.43□□□□□ -1.38
SLIRP-204ENST00000555890 MC1RQ01726 317 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 KLC1Q07866 573 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 RGS1Q08116 209 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 KCNAB2Q13303 367 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 FZD2Q14332 565 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 VMACQ2NL98 169 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 SFT2D3Q587I9 215 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 TOR1AIP1Q5JTV8 583 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 CPZQ66K79 652 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 ZNF425Q6IV72 752 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 ARMC6Q6NXE6 501 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 IRGCQ6NXR0 463 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 TRIM40Q6P9F5 258 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 RABEPKQ7Z6M1 372 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 AMIGO2Q86SJ2 522 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 PAQR7Q86WK9 346 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 PLD3Q8IV08 490 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 KBTBD2Q8IY47 623 aa6.43□□□□□ -1.38
SLIRP-204ENST00000555890 ADGRF3Q8IZF5 1079 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms