RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 KRT75O95678 551 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 CBX7O95931 251 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 SERPINA7P05543 415 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 CALB2P22676 271 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 PPIBP23284 216 aaKnown RBP11.6□□□□□ -0.55
SHMT2-221ENST00000555773 PTPN6P29350 595 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 CDKN2CP42773 168 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 SLC37A1P57057 533 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 TXNL4AP83876 142 aaKnown RBP11.6□□□□□ -0.55
SHMT2-221ENST00000555773 TLE3Q04726 772 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 AIMP2Q13155 320 aaKnown RBP11.6□□□□□ -0.55
SHMT2-221ENST00000555773 SRSF6Q13247 344 aaKnown RBP11.6□□□□□ -0.55
SHMT2-221ENST00000555773 ATP1A4Q13733 1029 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 BTBD16Q32M84 506 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 TRMT5Q32P41 509 aaKnown RBP11.6□□□□□ -0.55
SHMT2-221ENST00000555773 DCAF10Q5QP82 559 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 REP15Q6BDI9 236 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 JMJD6Q6NYC1 403 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-221ENST00000555773 HACD2Q6Y1H2 254 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 HSDL2Q6YN16 418 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 RNF111Q6ZNA4 994 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 C6orf120Q7Z4R8 191 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 KBTBD2Q8IY47 623 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 KDF1Q8NAX2 398 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-221ENST00000555773 APCDD1LQ8NCL9 501 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 NUP43Q8NFH3 380 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 OR52R1Q8NGF1 315 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 OR5L2Q8NGL0 311 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 ELP5Q8TE02 316 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 NCLNQ969V3 563 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 LRRC58Q96CX6 371 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 RCN3Q96D15 328 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 MAGED4Q96JG8 741 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 NPAS2Q99743 824 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 SH3GL1Q99961 368 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 HOPXQ9BPY8 73 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-221ENST00000555773 NUDT9Q9BW91 350 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 ZNF160Q9HCG1 818 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 ZCCHC3Q9NUD5 404 aaKnown RBP11.6□□□□□ -0.55
SHMT2-221ENST00000555773 SLAMF8Q9P0V8 285 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 BCAP29Q9UHQ4 241 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 POLHQ9Y253 713 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 RAXQ9Y2V3 346 aa11.6□□□□□ -0.55
SHMT2-221ENST00000555773 RNF103-CHMP3A0A140T963 221 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 HRKO00198 91 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 ATP5HO75947 161 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 ZFAND5O76080 213 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 CBX6O95503 412 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 GSNP06396 782 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 KRT16P08779 473 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 HOXB9P17482 250 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-221ENST00000555773 SSTR4P31391 388 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 PTGER1P34995 402 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 SOAT1P35610 550 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 CHI3L1P36222 383 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-221ENST00000555773 PRIM2P49643 509 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 EMDP50402 254 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 PRKAG1P54619 331 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 SOX8P57073 446 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 DCAF7P61962 342 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 VAC14Q08AM6 782 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 CDC20Q12834 499 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 MYBPC3Q14896 1274 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 RUNDC3AQ59EK9 446 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 SLC29A4Q7RTT9 530 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 DHDDSQ86SQ9 333 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 CLEC1AQ8NC01 280 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 DOK4Q8TEW6 326 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 ZFP90Q8TF47 636 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 ZCCHC14Q8WYQ9 949 aaKnown RBP11.59□□□□□ -0.55
SHMT2-221ENST00000555773 NEURL3Q96EH8 262 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 DCBLD2Q96PD2 775 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 MS4A4EQ96PG1 132 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 CGREF1Q99674 301 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 SLC35A5Q9BS91 424 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 DEFB126Q9BYW3 111 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 RAD21L1Q9H4I0 556 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 EPS8L2Q9H6S3 715 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 TPT1P8Q9HAU6 139 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 GIN1Q9NXP7 522 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 NDE1Q9NXR1 346 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 HEMK1Q9Y5R4 338 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-221ENST00000555773 FREM2Q5SZK8 3169 aa11.59□□□□□ -0.55
SHMT2-221ENST00000555773 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 TRBV5-3A0A0A0MS03 114 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 C15orf38-AP3S2A0A0A6YYH1 394 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 DUXAA6NLW8 204 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 EVPLLA8MZ36 301 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 K7ENP7 123 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 TAF4O00268 1085 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 CLIC1O00299 241 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 HNRNPCL1O60812 293 aaKnown RBP11.58□□□□□ -0.56
SHMT2-221ENST00000555773 UBOX5O94941 541 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 CLPSP04118 112 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 HMGN2P05204 90 aaKnown RBP11.58□□□□□ -0.56
SHMT2-221ENST00000555773 T-ENOLP0DO92 83 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 PRKAR1AP10644 381 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 PPICP45877 212 aa11.58□□□□□ -0.56
SHMT2-221ENST00000555773 ANXA11P50995 505 aaKnown RBP11.58□□□□□ -0.56
SHMT2-221ENST00000555773 RNF4P78317 190 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms