RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 NOXRED1Q6NXP6 359 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 BNC2Q6ZN30 1099 aaPredicted RBP18.88■□□□□ 0.61
VTI1B-205ENST00000555543 GK5Q6ZS86 529 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 Q6ZSR9 355 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 PRR22Q8IZ63 422 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 TAGAPQ8N103 731 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 OR52R1Q8NGF1 315 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 OR5M3Q8NGP4 307 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 OR9A2Q8NGT5 310 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 FAM76AQ8TAV0 307 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 ZIM3Q96PE6 472 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 NXF5Q9H1B4 397 aaKnown RBP18.88■□□□□ 0.61
VTI1B-205ENST00000555543 PROK2Q9HC23 129 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 SLC35C2Q9NQQ7 365 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 EHD3Q9NZN3 535 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 SENP1Q9P0U3 644 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 BCAP29Q9UHQ4 241 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 MAST4O15021 2626 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 MYO7BQ6PIF6 2116 aa18.88■□□□□ 0.61
VTI1B-205ENST00000555543 A0A1B0GTH9 108 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 SLC28A1O00337 649 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 CDC40O60508 579 aaKnown RBP eCLIP18.87■□□□□ 0.61
VTI1B-205ENST00000555543 SEC22BO75396 215 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 LINC00032P0C843 101 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 FBXW4P57775 412 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 CEBPEQ15744 281 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 UGT3A2Q3SY77 523 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 CEP85LQ5SZL2 805 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 CES4AQ5XG92 561 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 RNF165Q6ZSG1 346 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 EXOC3L1Q86VI1 746 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 TICAM1Q8IUC6 712 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 FBXW8Q8N3Y1 598 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 C17orf47Q8NEP4 570 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 OR6Y1Q8NGX8 325 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 AGR3Q8TD06 166 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 ZNF675Q8TD23 568 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 KAT2AQ92830 837 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 CCDC120Q96HB5 630 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 PKNOX2Q96KN3 472 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 EGLN2Q96KS0 407 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 DEFB127Q9H1M4 99 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 ZDHHC11Q9H8X9 412 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 LRTM1Q9HBL6 345 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 PLSCR2Q9NRY7 297 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 C1orf109Q9NX04 203 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 CNOT11Q9UKZ1 510 aaKnown RBP18.87■□□□□ 0.61
VTI1B-205ENST00000555543 ENTPD4Q9Y227 616 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 NPFFR2Q9Y5X5 522 aa18.87■□□□□ 0.61
VTI1B-205ENST00000555543 EXPH5Q8NEV8 1989 aa18.86■□□□□ 0.61
VTI1B-205ENST00000555543 CENPEQ02224 2701 aa18.86■□□□□ 0.61
VTI1B-205ENST00000555543 RGS14O43566 566 aa18.86■□□□□ 0.61
VTI1B-205ENST00000555543 NME6O75414 186 aaPredicted RBP18.86■□□□□ 0.61
VTI1B-205ENST00000555543 PDE9AO76083 593 aa18.86■□□□□ 0.61
VTI1B-205ENST00000555543 TUBBP07437 444 aa18.86■□□□□ 0.61
VTI1B-205ENST00000555543 FGF4P08620 206 aa18.86■□□□□ 0.61
VTI1B-205ENST00000555543 ABOP16442 354 aa18.86■□□□□ 0.61
VTI1B-205ENST00000555543 EMDP50402 254 aa18.86■□□□□ 0.61
VTI1B-205ENST00000555543 RPS6KA2Q15349 733 aa18.86■□□□□ 0.61
VTI1B-205ENST00000555543 TNFAIP8L3Q5GJ75 292 aa18.86■□□□□ 0.61
VTI1B-205ENST00000555543 MAMDC2Q7Z304 686 aaPredicted RBP18.86■□□□□ 0.61
VTI1B-205ENST00000555543 DND1Q8IYX4 353 aaKnown RBP18.86■□□□□ 0.61
VTI1B-205ENST00000555543 SAMD14Q8IZD0 417 aaPredicted RBP18.86■□□□□ 0.61
VTI1B-205ENST00000555543 TMEM251Q8N6I4 163 aa18.86■□□□□ 0.61
VTI1B-205ENST00000555543 TWIST2Q8WVJ9 160 aa18.86■□□□□ 0.61
VTI1B-205ENST00000555543 FCRL1Q96LA6 429 aa18.86■□□□□ 0.61
VTI1B-205ENST00000555543 IL1RL2Q9HB29 575 aa18.86■□□□□ 0.61
VTI1B-205ENST00000555543 GIMAP4Q9NUV9 329 aa18.86■□□□□ 0.61
VTI1B-205ENST00000555543 TRAF6Q9Y4K3 522 aa18.86■□□□□ 0.61
VTI1B-205ENST00000555543 LIPGQ9Y5X9 500 aa18.86■□□□□ 0.61
VTI1B-205ENST00000555543 ZNF407Q9C0G0 2248 aa18.85■□□□□ 0.61
VTI1B-205ENST00000555543 LRRC3CA6NJW4 275 aa18.85■□□□□ 0.61
VTI1B-205ENST00000555543 ACOT7O00154 380 aa18.85■□□□□ 0.61
VTI1B-205ENST00000555543 PIP5K1BO14986 540 aa18.85■□□□□ 0.61
VTI1B-205ENST00000555543 LSM1O15116 133 aaKnown RBP18.85■□□□□ 0.61
VTI1B-205ENST00000555543 CELA3AP09093 270 aa18.85■□□□□ 0.61
VTI1B-205ENST00000555543 NEFHP12036 1026 aa18.85■□□□□ 0.61
VTI1B-205ENST00000555543 ABCD3P28288 659 aa18.85■□□□□ 0.61
VTI1B-205ENST00000555543 MAGEA5P43359 124 aa18.85■□□□□ 0.61
VTI1B-205ENST00000555543 CASP6P55212 293 aa18.85■□□□□ 0.61
VTI1B-205ENST00000555543 SH2D4BQ5SQS7 431 aa18.85■□□□□ 0.61
VTI1B-205ENST00000555543 BICRALQ6AI39 1079 aa18.85■□□□□ 0.61
VTI1B-205ENST00000555543 NCCRP1Q6ZVX7 275 aaPredicted RBP18.85■□□□□ 0.61
VTI1B-205ENST00000555543 SLC22A16Q86VW1 577 aa18.85■□□□□ 0.61
VTI1B-205ENST00000555543 DDIASQ8IXT1 998 aa18.85■□□□□ 0.61
VTI1B-205ENST00000555543 METTL2AQ96IZ6 378 aaKnown RBP18.85■□□□□ 0.61
VTI1B-205ENST00000555543 CENPHQ9H3R5 247 aa18.85■□□□□ 0.61
VTI1B-205ENST00000555543 MIEF1Q9NQG6 463 aa18.85■□□□□ 0.61
VTI1B-205ENST00000555543 GIMAP2Q9UG22 337 aa18.85■□□□□ 0.61
VTI1B-205ENST00000555543 CFL2Q9Y281 166 aa18.85■□□□□ 0.61
VTI1B-205ENST00000555543 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.85■□□□□ 0.61
VTI1B-205ENST00000555543 GTF3C1Q12789 2109 aa18.85■□□□□ 0.61
VTI1B-205ENST00000555543 MYO1GB0I1T2 1018 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 CTIFO43310 598 aaKnown RBP18.84■□□□□ 0.61
VTI1B-205ENST00000555543 CHEK2O96017 543 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 RFPL3SP0C7P2 107 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 SDC1P18827 310 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 COL8A1P27658 744 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 SERPINB4P48594 390 aa18.84■□□□□ 0.61
VTI1B-205ENST00000555543 NRG3P56975 720 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms