RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 PRDX2P32119 198 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 CD86P42081 329 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 SLC7A2P52569 658 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 DPYSQ14117 519 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 ACSF3Q4G176 576 aaPredicted RBP4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 REP15Q6BDI9 236 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 EMBQ6PCB8 327 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 MOB2Q70IA6 237 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 LRRC49Q8IUZ0 686 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 MINDY2Q8NBR6 621 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 ZNF397Q8NF99 534 aaPredicted RBP4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 SPATA3Q8NHX4 192 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 TAF4BQ92750 862 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 CCDC51Q96ER9 411 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 TSPAN18Q96SJ8 248 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 ROPN1Q9HAT0 212 aaPredicted RBP4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 STARD5Q9NSY2 213 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 TAS2R16Q9NYV7 291 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 TAS2R3Q9NYW6 316 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 KLHDC2Q9Y2U9 406 aa4.38□□□□□ -1.71
CKS1BP1-201ENST00000555221 TEX48A0A1B0GUV7 120 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 LGALS8O00214 317 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 ADAM12O43184 909 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 CGAP01215 116 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 HSD17B1P14061 328 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 ETV5P41161 510 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 GPC3P51654 580 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 SGSHP51688 502 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 HERVK_113P63132 956 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 ERVK-8P63133 956 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 HTD2P86397 168 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 CD300CQ08708 224 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 SPP2Q13103 211 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 CEBPEQ15744 281 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 PARP6Q2NL67 630 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 ANKRD55Q3KP44 614 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 VWA2Q5GFL6 755 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 C9orf66Q5T8R8 295 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 ARMCX5Q6P1M9 558 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 ABRAXAS1Q6UWZ7 409 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 UNC5DQ6UXZ4 953 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 CATSPER4Q7RTX7 472 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 WDR36Q8NI36 951 aaKnown RBP4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 CCDC110Q8TBZ0 833 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 CCDC28BQ9BUN5 200 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 GPR174Q9BXC1 333 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 ERVK-6Q9BXR3 956 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 IL1RL2Q9HB29 575 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 NRN1Q9NPD7 142 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 IKZF3Q9UKT9 509 aa4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 MRPL11Q9Y3B7 192 aaKnown RBP4.37□□□□□ -1.71
CKS1BP1-201ENST00000555221 LAMC3Q9Y6N6 1575 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 IGHV3-16A0A0C4DH30 117 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 KRTAP16-1A8MUX0 517 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 NDUFA7O95182 113 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 PTBP3O95758 552 aaKnown RBP4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 HCKP08631 526 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 PTPN6P29350 595 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 TRIM23P36406 574 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 GSK3BP49841 420 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 PRELPP51888 382 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 KRTAP1-1Q07627 177 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 BNIP1Q12981 228 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 LRIT3Q3SXY7 679 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 LDLRAP1Q5SW96 308 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 ZNF343Q6P1L6 599 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 ZCCHC12Q6PEW1 402 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 ISLR2Q6UXK2 745 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 ZNF841Q6ZN19 808 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 GPRIN3Q6ZVF9 776 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 PAQR9Q6ZVX9 377 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 MAPK1IP1LQ8NDC0 245 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 C17orf47Q8NEP4 570 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 RASL10AQ92737 203 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 BIRC7Q96CA5 298 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 TBC1D31Q96DN5 1066 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 RBM18Q96H35 190 aaKnown RBP4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 ST6GALNAC5Q9BVH7 336 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 POLE3Q9NRF9 147 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 ABCC13Q9NSE7 274 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 KLK13Q9UKR3 277 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 ZNF346Q9UL40 294 aaKnown RBP4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 FKBP7Q9Y680 259 aa4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.36□□□□□ -1.71
CKS1BP1-201ENST00000555221 FER1L5A0AVI2 2057 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 A0A0J9YVX5 310 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 A0A1B0GTH9 108 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 FOXI3A8MTJ6 420 aaPredicted RBP4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 E9PMD0 336 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 K7ERI5 159 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 SGK494L7N484 410 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 AKR7A3O95154 331 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 NUDT14O95848 222 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 ECDO95905 644 aaPredicted RBP4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 IGHV3-13P01766 116 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 SLC35G4P0C7Q5 338 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 ZCCHC18P0CG32 403 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 RRASP10301 218 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 FUT1P19526 365 aa4.35□□□□□ -1.71
CKS1BP1-201ENST00000555221 PTMSP20962 102 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms