RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 ATP5A1P25705 553 aaKnown RBP9.77□□□□□ -0.85
SHMT2-215ENST00000554656 MSX1P28360 303 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 CHRNB4P30926 498 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 PPIAP62937 165 aaKnown RBP9.77□□□□□ -0.85
SHMT2-215ENST00000554656 BTKQ06187 659 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 TRAF3Q13114 568 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 SMU1Q2TAY7 513 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 LSM12Q3MHD2 195 aaKnown RBP9.77□□□□□ -0.85
SHMT2-215ENST00000554656 ARHGAP11AQ6P4F7 1023 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 HSDL2Q6YN16 418 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 DGAT2L6Q6ZPD8 337 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 RPS27LQ71UM5 84 aaKnown RBP9.77□□□□□ -0.85
SHMT2-215ENST00000554656 GPALPP1Q8IXQ4 340 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 EID3Q8N140 333 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 TMEM132CQ8N3T6 1108 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 RNF175Q8N4F7 328 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 TMEM251Q8N6I4 163 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 TEX9Q8N6V9 391 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 OR5M9Q8NGP3 310 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 LILRB4Q8NHJ6 448 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 SLC2A12Q8TD20 617 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 ZNF721Q8TF20 911 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 CHTF18Q8WVB6 975 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 TWIST2Q8WVJ9 160 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 ATP6V1E2Q96A05 226 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 NSL1Q96IY1 281 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 CCDC106Q9BWC9 280 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 SORBS1Q9BX66 1292 aaKnown RBP9.77□□□□□ -0.85
SHMT2-215ENST00000554656 NUF2Q9BZD4 464 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 OR8D2Q9GZM6 311 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 NMUR2Q9GZQ4 415 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 TP63Q9H3D4 680 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-215ENST00000554656 NOL11Q9H8H0 719 aaKnown RBP9.77□□□□□ -0.85
SHMT2-215ENST00000554656 IPPKQ9H8X2 491 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 COPS7BQ9H9Q2 264 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-215ENST00000554656 LYRM4Q9HD34 91 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 COQ3Q9NZJ6 369 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 TNFRSF10DQ9UBN6 386 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 ZNF225Q9UK10 706 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 MRPS33Q9Y291 106 aaKnown RBP9.77□□□□□ -0.85
SHMT2-215ENST00000554656 FAM215AQ9Y5M1 114 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 DNAJC15Q9Y5T4 150 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 CLCA3PQ9Y6N3 262 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 KIAA1549Q9HCM3 1950 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 ITPR3Q14573 2671 aa9.77□□□□□ -0.85
SHMT2-215ENST00000554656 A0A088AWK7 358 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 SERTM1A2A2V5 107 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 CAPN14A8MX76 684 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 C17orf105B2RV13 164 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 TMEM233B4DJY2 109 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 NPIPA2E9PIF3 369 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 NPIPA3F8WFD2 350 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 HRKO00198 91 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 OR7A17O14581 309 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 CLGNO14967 610 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 FGF17O60258 216 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 SH3BGRLO75368 114 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 NADKO95544 446 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-215ENST00000554656 IGHG3P01860 377 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 CAPN3P20807 821 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 ENDOUP21128 410 aaKnown RBP9.76□□□□□ -0.85
SHMT2-215ENST00000554656 ZNF10P21506 573 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-215ENST00000554656 EPHA3P29320 983 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 CASP2P42575 452 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 MAGEA5P43359 124 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 DNASE1L1P49184 302 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 MRPL19P49406 292 aaKnown RBP9.76□□□□□ -0.85
SHMT2-215ENST00000554656 ATP4BP51164 291 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 MNAT1P51948 309 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 RIPPLY3P57055 190 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 RNF4P78317 190 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 IGLV3-21P80748 117 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-215ENST00000554656 PLGLB1Q02325 96 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 PMPCAQ10713 525 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 CHIT1Q13231 466 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 PDCD2Q16342 344 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-215ENST00000554656 XKR7Q5GH72 579 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 RTL6Q6ICC9 239 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 OGFOD2Q6N063 350 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 LYPD8Q6UX82 237 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 RTL4Q6ZR62 310 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 CHSY3Q70JA7 882 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 LARP4Q71RC2 724 aaKnown RBP eCLIP9.76□□□□□ -0.85
SHMT2-215ENST00000554656 TRILQ7L0X0 811 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 MILR1Q7Z6M3 343 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 DMRTC2Q8IXT2 367 aaPredicted RBP9.76□□□□□ -0.85
SHMT2-215ENST00000554656 ACOT4Q8N9L9 421 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 L3MBTL4Q8NA19 623 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 MORN4Q8NDC4 146 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 OR14A16Q8NHC5 309 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 AGR3Q8TD06 166 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 ASB5Q8WWX0 329 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 RND1Q92730 232 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 DAZLQ92904 295 aaKnown RBP9.76□□□□□ -0.85
SHMT2-215ENST00000554656 KCNC2Q96PR1 638 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 OR52B2Q96RD2 323 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 EFCAB11Q9BUY7 163 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 SHCBP1LQ9BZQ2 653 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 ZNF385DQ9H6B1 395 aa9.76□□□□□ -0.85
SHMT2-215ENST00000554656 SH2D2AQ9NP31 389 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms