RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 SEMA3GQ9NS98 782 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 TXLNGQ9NUQ3 528 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 SYNDIG1LA6NDD5 238 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 B2RBV5 119 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 TAF4O00268 1085 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 PCDH17O14917 1159 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 TO15178 435 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 ASNA1O43681 348 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 ATP5HO75947 161 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 NKX2-2O95096 273 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 GSNP06396 782 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 MMP11P24347 488 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 SSTR4P31391 388 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 MAGEA8P43361 318 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 MTPNP58546 118 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 SHISA6Q6ZSJ9 500 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 CPEB2Q7Z5Q1 589 aaKnown RBP6.28□□□□□ -1.4
LINC00517-202ENST00000554257 MORN4Q8NDC4 146 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 OR11G2Q8NGC1 345 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 PSMF1Q92530 271 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 SLC35A4Q96G79 324 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 C16orf58Q96GQ5 468 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 MIEF1Q9NQG6 463 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 SH3BP4Q9P0V3 963 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 IFT80Q9P2H3 777 aaPredicted RBP6.28□□□□□ -1.4
LINC00517-202ENST00000554257 MKL2Q9ULH7 1088 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 MGAQ8IWI9 3026 aa6.28□□□□□ -1.4
LINC00517-202ENST00000554257 PRAMEF25A6NGN4 478 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 EBAG9O00559 213 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 RFXANKO14593 260 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 AIM2O14862 343 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 EMC8O43402 210 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 ERAL1O75616 437 aaKnown RBP6.27□□□□□ -1.41
LINC00517-202ENST00000554257 CELA2AP08217 269 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 KRT16P08779 473 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 TLX1P31314 330 aaPredicted RBP6.27□□□□□ -1.41
LINC00517-202ENST00000554257 EEFSECP57772 596 aaKnown RBP6.27□□□□□ -1.41
LINC00517-202ENST00000554257 OR4D2P58180 307 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 ACTN3Q08043 901 aaPredicted RBP6.27□□□□□ -1.41
LINC00517-202ENST00000554257 HSPB3Q12988 150 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 DNASE1L3Q13609 305 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 SSPNQ14714 243 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 EXOSC7Q15024 291 aaKnown RBP6.27□□□□□ -1.41
LINC00517-202ENST00000554257 EBPQ15125 230 aaKnown RBP6.27□□□□□ -1.41
LINC00517-202ENST00000554257 TGIF1Q15583 401 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 CCDC157Q569K6 752 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.27□□□□□ -1.41
LINC00517-202ENST00000554257 FNDC7Q5VTL7 733 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 CDC73Q6P1J9 531 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 TSEN54Q7Z6J9 526 aaKnown RBP6.27□□□□□ -1.41
LINC00517-202ENST00000554257 OR7G1Q8NGA0 311 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 OR5AK3PQ8NH89 298 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 MOAP1Q96BY2 351 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 MS4A4EQ96PG1 132 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 MMADHCQ9H3L0 296 aaPredicted RBP6.27□□□□□ -1.41
LINC00517-202ENST00000554257 TPT1P8Q9HAU6 139 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 KCNE5Q9UJ90 142 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 PADI1Q9ULC6 663 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 PRPF19Q9UMS4 504 aaKnown RBP6.27□□□□□ -1.41
LINC00517-202ENST00000554257 SEC16AO15027 2179 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 TRABD2BA6NFA1 517 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 MASP2O00187 686 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 CLIC1O00299 241 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 MAN1A2O60476 641 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 ARAFP10398 606 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 ESRRAP11474 423 aaPredicted RBP6.27□□□□□ -1.41
LINC00517-202ENST00000554257 HTR1EP28566 365 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 MPIP34949 423 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 SOX8P57073 446 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 C6orf120Q7Z4R8 191 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 ZNF227Q86WZ6 799 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 SAMD14Q8IZD0 417 aaPredicted RBP6.27□□□□□ -1.41
LINC00517-202ENST00000554257 VWA5B2Q8N398 1253 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 OR8K3Q8NH51 312 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 OR14A16Q8NHC5 309 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 C16orf52Q8NHV5 167 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 FAM122AQ96E09 287 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 DUS3LQ96G46 650 aaKnown RBP6.27□□□□□ -1.41
LINC00517-202ENST00000554257 PANX1Q96RD7 426 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 ZBTB18Q99592 522 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 PELOQ9BRX2 385 aaKnown RBP6.27□□□□□ -1.41
LINC00517-202ENST00000554257 SPATA9Q9BWV2 254 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 RMND5AQ9H871 391 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 FOLH1BQ9HBA9 442 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 SUCOQ9UBS9 1254 aaKnown RBP6.27□□□□□ -1.41
LINC00517-202ENST00000554257 GPR55Q9Y2T6 319 aaPredicted RBP6.27□□□□□ -1.41
LINC00517-202ENST00000554257 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.27□□□□□ -1.41
LINC00517-202ENST00000554257 IGHV3-20A0A0C4DH32 117 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 ANGPT2O15123 496 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 CHRM4P08173 479 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 GSK3BP49841 420 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 SLC7A2P52569 658 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 MANFP55145 182 aaKnown RBP6.27□□□□□ -1.41
LINC00517-202ENST00000554257 SLC26A5P58743 744 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 NFYCQ13952 458 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 SFT2D3Q587I9 215 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 ZCCHC12Q6PEW1 402 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 ZAR1Q86SH2 424 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 ULK2Q8IYT8 1036 aa6.27□□□□□ -1.41
LINC00517-202ENST00000554257 DEFB107AQ8IZN7 70 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms