RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 PCLAFQ15004 111 aa16.72■□□□□ 0.27
SHMT2-206ENST00000553529 ZNF628Q5EBL2 1059 aa16.72■□□□□ 0.27
SHMT2-206ENST00000553529 ARHGAP11AQ6P4F7 1023 aa16.72■□□□□ 0.27
SHMT2-206ENST00000553529 FRMD7Q6ZUT3 714 aa16.72■□□□□ 0.27
SHMT2-206ENST00000553529 CCDC63Q8NA47 563 aa16.72■□□□□ 0.27
SHMT2-206ENST00000553529 DIO2Q92813 273 aa16.72■□□□□ 0.27
SHMT2-206ENST00000553529 GALNT9Q9HCQ5 603 aa16.72■□□□□ 0.27
SHMT2-206ENST00000553529 PFDN4Q9NQP4 134 aa16.72■□□□□ 0.27
SHMT2-206ENST00000553529 RNF6Q9Y252 685 aa16.72■□□□□ 0.27
SHMT2-206ENST00000553529 GNG14A0A1W2PPG7 69 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 OR6C76A6NM76 312 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 B4DXG7 233 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 CLDN14O95500 239 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 FREM3P0C091 2139 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 CSNK2A2P19784 350 aaPredicted RBP16.71■□□□□ 0.27
SHMT2-206ENST00000553529 TACR1P25103 407 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 ABCD3P28288 659 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 PTGDSP41222 190 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 EMDP50402 254 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 PKNOX1P55347 436 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 CORO7P57737 925 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 KRTAP10-9P60411 292 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 PMPCAQ10713 525 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 RPS6KA2Q15349 733 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 ANKRD26P1Q6NSI1 321 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 NPSR1Q6W5P4 371 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 WDR53Q7Z5U6 358 aaPredicted RBP16.71■□□□□ 0.27
SHMT2-206ENST00000553529 ZNF295-AS1Q8N0V1 137 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 OR2T11Q8NH01 316 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 SPPL2AQ8TCT8 520 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 CTHRC1Q96CG8 243 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 RILPQ96NA2 401 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 DOHHQ9BU89 302 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.71■□□□□ 0.276e-6■■□□□ 12.1
SHMT2-206ENST00000553529 ALKBH4Q9NXW9 302 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 GIMAP2Q9UG22 337 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 KLF2Q9Y5W3 355 aaPredicted RBP16.71■□□□□ 0.27
SHMT2-206ENST00000553529 DNAJC13O75165 2243 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 CACNA1CQ13936 2221 aa16.71■□□□□ 0.27
SHMT2-206ENST00000553529 TEX15Q9BXT5 2789 aa16.71■□□□□ 0.26
SHMT2-206ENST00000553529 COPEO14579 308 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 GNB5O14775 395 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 HNRNPRO43390 633 aaKnown RBP16.7■□□□□ 0.26
SHMT2-206ENST00000553529 TRIM3O75382 744 aaPredicted RBP16.7■□□□□ 0.26
SHMT2-206ENST00000553529 ENO1P06733 434 aaKnown RBP16.7■□□□□ 0.26
SHMT2-206ENST00000553529 CHRNGP07510 517 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 HSD3B1P14060 373 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 CPA3P15088 417 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 HSD3B2P26439 372 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 ARRB2P32121 409 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 CRHR1P34998 444 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 ADH7P40394 386 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 SMSP52788 366 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 SLC18A2Q05940 514 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 ACSM2AQ08AH3 577 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 MAP4K2Q12851 820 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 BIKQ13323 160 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 SNTB1Q13884 538 aaKnown RBP16.7■□□□□ 0.26
SHMT2-206ENST00000553529 HYAL4Q2M3T9 481 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 SPDYAQ5MJ70 313 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 DCST1Q5T197 706 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 C10orf62Q5T681 223 aaPredicted RBP16.7■□□□□ 0.26
SHMT2-206ENST00000553529 HLA-DQA1Q5Y7H0 255 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 ACSM2BQ68CK6 577 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 XKRXQ6PP77 449 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 PLXDC2Q6UX71 529 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 LCA5Q86VQ0 697 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 TDRPQ86YL5 185 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 LRRC25Q8N386 305 aaPredicted RBP16.7■□□□□ 0.26
SHMT2-206ENST00000553529 SLC15A4Q8N697 577 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 OR7G2Q8NG99 324 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 OR4N2Q8NGD1 307 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 PHF10Q8WUB8 498 aaKnown RBP16.7■□□□□ 0.26
SHMT2-206ENST00000553529 HGDQ93099 445 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 OMA1Q96E52 524 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 EGLN2Q96KS0 407 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 GNRHR2Q96P88 292 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 GATA5Q9BWX5 397 aaPredicted RBP16.7■□□□□ 0.26
SHMT2-206ENST00000553529 TRIM8Q9BZR9 551 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 TUBB1Q9H4B7 451 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 LDAHQ9H6V9 325 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 EXO5Q9H790 373 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 ZFP64Q9NPA5 681 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 NPDC1Q9NQX5 325 aaPredicted RBP16.7■□□□□ 0.26
SHMT2-206ENST00000553529 OXSMQ9NWU1 459 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 SLC6A5Q9Y345 797 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 CCL27Q9Y4X3 112 aa16.7■□□□□ 0.26
SHMT2-206ENST00000553529 CSMD2Q7Z408 3487 aa16.69■□□□□ 0.26
SHMT2-206ENST00000553529 TRGV5A0A0B4J1U4 118 aa16.69■□□□□ 0.26
SHMT2-206ENST00000553529 A0A1B0GVC2 190 aa16.69■□□□□ 0.26
SHMT2-206ENST00000553529 UGT2B11O75310 529 aa16.69■□□□□ 0.26
SHMT2-206ENST00000553529 ABCB1P08183 1280 aaPredicted RBP16.69■□□□□ 0.26
SHMT2-206ENST00000553529 ANXA4P09525 319 aaPredicted RBP16.69■□□□□ 0.26
SHMT2-206ENST00000553529 MAN2A2P49641 1150 aa16.69■□□□□ 0.26
SHMT2-206ENST00000553529 SLC10A1Q14973 349 aa16.69■□□□□ 0.26
SHMT2-206ENST00000553529 EIPR1Q53HC9 387 aa16.69■□□□□ 0.26
SHMT2-206ENST00000553529 MTFR2Q6P444 385 aa16.69■□□□□ 0.26
SHMT2-206ENST00000553529 ZCCHC23Q6ZST2 131 aa16.69■□□□□ 0.26
SHMT2-206ENST00000553529 SEM1Q6ZVN7 128 aa16.69■□□□□ 0.26
SHMT2-206ENST00000553529 TICAM1Q8IUC6 712 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms