RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 ZNF888P0CJ79 500 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-221ENST00000553498 NR2F1P10589 423 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 CD247P20963 164 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 RRM2P31350 389 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 IFNA8P32881 189 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 CAPZBP47756 277 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 CXCL12P48061 93 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 KCNJ5P48544 419 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 LIM2P55344 173 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 NXPH1P58417 271 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 ARF3P61204 181 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-221ENST00000553498 RPL6Q02878 288 aaKnown RBP6.87□□□□□ -1.31
ATXN3-221ENST00000553498 KCNAB2Q13303 367 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 TUBA3CQ13748 450 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 C16orf72Q14CZ0 275 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 CCDC85BQ15834 202 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-221ENST00000553498 MICAQ29983 383 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 TCTE1Q5JU00 501 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 COLEC12Q5KU26 742 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 RNF220Q5VTB9 566 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 ZNF691Q5VV52 312 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 BROXQ5VW32 411 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 AP1ARQ63HQ0 302 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 ZNF773Q6PK81 442 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 ZNF605Q86T29 641 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 MMP21Q8N119 569 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 CSNK1A1LQ8N752 337 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 C19orf47Q8N9M1 422 aaKnown RBP6.87□□□□□ -1.31
ATXN3-221ENST00000553498 ATG16L2Q8NAA4 619 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 KCT2Q8NC54 265 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 GALNT11Q8NCW6 608 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 TOR1AIP2Q8NFQ8 470 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 OR4C15Q8NGM1 316 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 ZNF675Q8TD23 568 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 NCSTNQ92542 709 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 CNRIP1Q96F85 164 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-221ENST00000553498 FBXL20Q96IG2 436 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 DHRS1Q96LJ7 313 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 C10orf90Q96M02 699 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 MS4A4EQ96PG1 132 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 MBOAT4Q96T53 435 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 CDX2Q99626 313 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-221ENST00000553498 PITX2Q99697 317 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 MAPKAP1Q9BPZ7 522 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 TREX2Q9BQ50 279 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-221ENST00000553498 CCDC3Q9BQI4 270 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 ACTRT3Q9BYD9 372 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 POLR2J2Q9GZM3 115 aaKnown RBP6.87□□□□□ -1.31
ATXN3-221ENST00000553498 POLR2J3Q9H1A7 115 aaKnown RBP6.87□□□□□ -1.31
ATXN3-221ENST00000553498 DUSP15Q9H1R2 295 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-221ENST00000553498 OR51I1Q9H343 314 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 ANKRD19PQ9H560 264 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 SMURF2Q9HAU4 748 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 SRA1Q9HD15 236 aaKnown RBP6.87□□□□□ -1.31
ATXN3-221ENST00000553498 CCNB1IP1Q9NPC3 277 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 PAPOLBQ9NRJ5 636 aaKnown RBP6.87□□□□□ -1.31
ATXN3-221ENST00000553498 KRT84Q9NSB2 600 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 SEC14L3Q9UDX4 400 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 FBXW2Q9UKT8 454 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 RAB23Q9ULC3 237 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 NDRG4Q9ULP0 352 aaKnown RBP6.87□□□□□ -1.31
ATXN3-221ENST00000553498 MRPS33Q9Y291 106 aaKnown RBP6.87□□□□□ -1.31
ATXN3-221ENST00000553498 SLC9A8Q9Y2E8 581 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 LYVE1Q9Y5Y7 322 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 AK5Q9Y6K8 562 aa6.87□□□□□ -1.31
ATXN3-221ENST00000553498 DSPPQ9NZW4 1301 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 TRBV23OR9-2A0A075B6M9 112 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 A0A0J9YVX5 310 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 HYKKA2RU49 373 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 EIF4E1BA6NMX2 242 aaKnown RBP6.86□□□□□ -1.31
ATXN3-221ENST00000553498 WASHC1A8K0Z3 465 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 C4orf51C9J302 202 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 E9PQ18 207 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 LINC01387J3KSC0 135 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 SCAMP1O15126 338 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 PGRMC2O15173 223 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 PPM1DO15297 605 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 AQP9O43315 295 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 KIF1CO43896 1103 aaKnown RBP6.86□□□□□ -1.31
ATXN3-221ENST00000553498 MPZL2O60487 215 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 PLOD3O60568 738 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 GADD45GO95257 159 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 GPR75O95800 540 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 ADAP00813 363 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 HMGN2P05204 90 aaKnown RBP6.86□□□□□ -1.31
ATXN3-221ENST00000553498 PROS1P07225 676 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 FESP07332 822 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 CPMP14384 443 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 ATP6V1B1P15313 513 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 PORP16435 677 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-221ENST00000553498 JUNBP17275 347 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-221ENST00000553498 EPHA1P21709 976 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 CDH3P22223 829 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 CRHBPP24387 322 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 AQP1P29972 269 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 PRKAR1BP31321 381 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 GPR3P46089 330 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 LIMS1P48059 325 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 DAPP51397 102 aa6.86□□□□□ -1.31
ATXN3-221ENST00000553498 XKP51811 444 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms