RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 FNDC11Q9BVV2 318 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 ALOXE3Q9BYJ1 711 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 TRIM45Q9H8W5 580 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-205ENST00000553474 C3orf14Q9HBI5 128 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 PRDM9Q9NQV7 894 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 LYARQ9NX58 379 aaKnown RBP12.18□□□□□ -0.46
SHMT2-205ENST00000553474 OR6C2Q9NZP2 312 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 SEC14L4Q9UDX3 406 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 ZFR2Q9UPR6 939 aaKnown RBP12.18□□□□□ -0.46
SHMT2-205ENST00000553474 MDC1Q14676 2089 aaKnown RBP12.18□□□□□ -0.46
SHMT2-205ENST00000553474 A0A075B6Q4 140 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 GSAPA4D1B5 854 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 KRBA1A5PL33 1030 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 H3BN98 237 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 PLRG1O43660 514 aaKnown RBP12.18□□□□□ -0.46
SHMT2-205ENST00000553474 PAK4O96013 591 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-205ENST00000553474 CSNK2A2P19784 350 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-205ENST00000553474 ATP5A1P25705 553 aaKnown RBP12.18□□□□□ -0.46
SHMT2-205ENST00000553474 POU1F1P28069 291 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 IFNA8P32881 189 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 TARDBPQ13148 414 aaKnown RBP eCLIP12.18□□□□□ -0.46
SHMT2-205ENST00000553474 SLAMF1Q13291 335 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 C1DQ13901 141 aaKnown RBP12.18□□□□□ -0.46
SHMT2-205ENST00000553474 SEC23BQ15437 767 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 TPRG1LQ5T0D9 272 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 FAM180BQ6P0A1 224 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 SLC48A1Q6P1K1 146 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 C1orf94Q6P1W5 598 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 ZNF793Q6ZN11 406 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 ATCAYQ86WG3 371 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 ACOT4Q8N9L9 421 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 OR2L3Q8NG85 312 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 OR52E1Q8NGJ3 308 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 WDR36Q8NI36 951 aaKnown RBP12.18□□□□□ -0.46
SHMT2-205ENST00000553474 CDADC1Q9BWV3 514 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 PRRG3Q9BZD7 231 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 PLA2G2FQ9BZM2 168 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 PRDM7Q9NQW5 492 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 C5AR2Q9P296 337 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 CRNNQ9UBG3 495 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-205ENST00000553474 TRPC4Q9UBN4 977 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 PNMA8BQ9ULN7 279 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-205ENST00000553474 SCML1Q9UN30 329 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 PCDHGA4Q9Y5G9 962 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 DOCK9Q9BZ29 2069 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 A0A1W2PP55 124 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 DSCR3O14972 297 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 EMC8O43402 210 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 ERI3O43414 337 aaKnown RBP12.17□□□□□ -0.46
SHMT2-205ENST00000553474 ENTPD6O75354 484 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 AGR2O95994 175 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 ASGR2P07307 311 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 BCL6P41182 706 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 COPZ1P61923 177 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 IFITM3Q01628 133 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 SFSWAPQ12872 951 aaKnown RBP12.17□□□□□ -0.46
SHMT2-205ENST00000553474 HYAL2Q12891 473 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 HTR4Q13639 388 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 FGL2Q14314 439 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 SYPL1Q16563 259 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 WASH2PQ6VEQ5 465 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 MFSD9Q8NBP5 474 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 TOR1AIP2Q8NFQ8 470 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 OR9Q1Q8NGQ5 310 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 ELSPBP1Q96BH3 223 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 SLC22A18Q96BI1 424 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 RPP25Q9BUL9 199 aaKnown RBP12.17□□□□□ -0.46
SHMT2-205ENST00000553474 SLC17A9Q9BYT1 436 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 ROGDIQ9GZN7 287 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 C6orf62Q9GZU0 229 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-205ENST00000553474 OR51E2Q9H255 320 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 IRAK4Q9NWZ3 460 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 KLHL20Q9Y2M5 609 aa12.17□□□□□ -0.46
SHMT2-205ENST00000553474 LSM2Q9Y333 95 aaKnown RBP12.17□□□□□ -0.46
SHMT2-205ENST00000553474 LOC100506127A0A0U1RQW1 187 aa12.16□□□□□ -0.46
SHMT2-205ENST00000553474 PRAMEF27A3QJZ7 478 aa12.16□□□□□ -0.46
SHMT2-205ENST00000553474 DUXAA6NLW8 204 aa12.16□□□□□ -0.46
SHMT2-205ENST00000553474 PTTG1O95997 202 aa12.16□□□□□ -0.46
SHMT2-205ENST00000553474 SERPIND1P05546 499 aa12.16□□□□□ -0.46
SHMT2-205ENST00000553474 HSMCR30P0CW71 290 aa12.16□□□□□ -0.46
SHMT2-205ENST00000553474 DBTP11182 482 aaKnown RBP12.16□□□□□ -0.46
SHMT2-205ENST00000553474 PSMA1P25786 263 aaKnown RBP12.16□□□□□ -0.46
SHMT2-205ENST00000553474 PCYT1AP49585 367 aa12.16□□□□□ -0.46
SHMT2-205ENST00000553474 RPS3AP61247 264 aaKnown RBP12.16□□□□□ -0.46
SHMT2-205ENST00000553474 SPHARQ15513 63 aa12.16□□□□□ -0.46
SHMT2-205ENST00000553474 KLHL22Q53GT1 634 aa12.16□□□□□ -0.46
SHMT2-205ENST00000553474 PERM1Q5SV97 790 aa12.16□□□□□ -0.46
SHMT2-205ENST00000553474 ZNF425Q6IV72 752 aa12.16□□□□□ -0.46
SHMT2-205ENST00000553474 FLCNQ8NFG4 579 aa12.16□□□□□ -0.46
SHMT2-205ENST00000553474 VANGL1Q8TAA9 524 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-205ENST00000553474 APOOQ9BUR5 198 aa12.16□□□□□ -0.46
SHMT2-205ENST00000553474 AICDAQ9GZX7 198 aa12.16□□□□□ -0.46
SHMT2-205ENST00000553474 SLC6A20Q9NP91 592 aa12.16□□□□□ -0.46
SHMT2-205ENST00000553474 MRPS18AQ9NVS2 196 aaKnown RBP12.16□□□□□ -0.46
SHMT2-205ENST00000553474 TRNAU1APQ9NX07 287 aaKnown RBP12.16□□□□□ -0.46
SHMT2-205ENST00000553474 CES1P1Q9UKY3 287 aa12.16□□□□□ -0.46
SHMT2-205ENST00000553474 DIMT1Q9UNQ2 313 aaKnown RBP12.16□□□□□ -0.46
SHMT2-205ENST00000553474 PDZK1P1A8MUH7 402 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 LOC110117498-PIK3R3F6TDL0 507 aa12.15□□□□□ -0.46
SHMT2-205ENST00000553474 ARHGAP33O14559 1287 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms