RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 TANKQ92844 425 aa10.89□□□□□ -0.67
CKAP4-202ENST00000552828 MBD6Q96DN6 1003 aa10.89□□□□□ -0.67
CKAP4-202ENST00000552828 CMTM7Q96FZ5 175 aa10.89□□□□□ -0.67
CKAP4-202ENST00000552828 RBM18Q96H35 190 aaKnown RBP10.89□□□□□ -0.67
CKAP4-202ENST00000552828 FBXL20Q96IG2 436 aa10.89□□□□□ -0.67
CKAP4-202ENST00000552828 ALPK1Q96QP1 1244 aa10.89□□□□□ -0.67
CKAP4-202ENST00000552828 MTERF1Q99551 399 aaKnown RBP10.89□□□□□ -0.67
CKAP4-202ENST00000552828 SH3GL2Q99962 352 aa10.89□□□□□ -0.67
CKAP4-202ENST00000552828 CENPKQ9BS16 269 aa10.89□□□□□ -0.67
CKAP4-202ENST00000552828 C12orf65Q9H3J6 166 aaKnown RBP10.89□□□□□ -0.67
CKAP4-202ENST00000552828 LIME1Q9H400 295 aa10.89□□□□□ -0.67
CKAP4-202ENST00000552828 OXSMQ9NWU1 459 aa10.89□□□□□ -0.67
CKAP4-202ENST00000552828 MS4A12Q9NXJ0 267 aa10.89□□□□□ -0.67
CKAP4-202ENST00000552828 CRIM1Q9NZV1 1036 aa10.89□□□□□ -0.67
CKAP4-202ENST00000552828 CNIH4Q9P003 139 aa10.89□□□□□ -0.67
CKAP4-202ENST00000552828 BOKQ9UMX3 212 aaPredicted RBP10.89□□□□□ -0.67
CKAP4-202ENST00000552828 EDARQ9UNE0 448 aa10.89□□□□□ -0.67
CKAP4-202ENST00000552828 STK38LQ9Y2H1 464 aa10.89□□□□□ -0.67
CKAP4-202ENST00000552828 CHCHD2Q9Y6H1 151 aaPredicted RBP10.89□□□□□ -0.67
CKAP4-202ENST00000552828 ABCA4P78363 2273 aa10.89□□□□□ -0.67
CKAP4-202ENST00000552828 ANKRD33BA6NCL7 494 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 A6NNC1 897 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 AHRRA9YTQ3 701 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 HRKO00198 91 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 PPP6CO00743 305 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 DYRK3O43781 588 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 TGFB1P01137 390 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 FOSL1P15407 271 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 CPN2P22792 545 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 PTX3P26022 381 aaPredicted RBP10.88□□□□□ -0.67
CKAP4-202ENST00000552828 CEACAM8P31997 349 aaPredicted RBP10.88□□□□□ -0.67
CKAP4-202ENST00000552828 NAGLUP54802 743 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 KCNJ2P63252 427 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 LCP2Q13094 533 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 IFT88Q13099 833 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 DAZAP2Q15038 168 aaPredicted RBP10.88□□□□□ -0.67
CKAP4-202ENST00000552828 GGTA1PQ4G0N0 100 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 DEPDC1Q5TB30 811 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 KHDRBS2Q5VWX1 349 aaKnown RBP10.88□□□□□ -0.67
CKAP4-202ENST00000552828 FRG2Q64ET8 278 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 POMZP3Q6PJE2 187 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 DGAT2L6Q6ZPD8 337 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 WDR53Q7Z5U6 358 aaPredicted RBP10.88□□□□□ -0.67
CKAP4-202ENST00000552828 OR4N5Q8IXE1 308 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 RELL2Q8NC24 303 aaPredicted RBP10.88□□□□□ -0.67
CKAP4-202ENST00000552828 TCP10LQ8TDR4 215 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 FAM222BQ8WU58 562 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 PGM2Q96G03 612 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 RMND5BQ96G75 393 aaPredicted RBP10.88□□□□□ -0.67
CKAP4-202ENST00000552828 ART5Q96L15 291 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 DGAT2Q96PD7 388 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 FAM111AQ96PZ2 611 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 FRG2BQ96QU4 278 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 ZNF382Q96SR6 550 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 GPATCH1Q9BRR8 931 aaKnown RBP10.88□□□□□ -0.67
CKAP4-202ENST00000552828 STMN4Q9H169 189 aaPredicted RBP10.88□□□□□ -0.67
CKAP4-202ENST00000552828 ELOVL6Q9H5J4 265 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 EXO5Q9H790 373 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 RPF2Q9H7B2 306 aaKnown RBP10.88□□□□□ -0.67
CKAP4-202ENST00000552828 DMRT3Q9NQL9 472 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.88□□□□□ -0.672e-8■■□□□ 12
CKAP4-202ENST00000552828 ALKBH4Q9NXW9 302 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 PSD3Q9NYI0 1048 aa10.88□□□□□ -0.67
CKAP4-202ENST00000552828 ZNF629Q9UEG4 869 aaPredicted RBP10.88□□□□□ -0.67
CKAP4-202ENST00000552828 CNOT11Q9UKZ1 510 aaKnown RBP10.88□□□□□ -0.67
CKAP4-202ENST00000552828 RPH3AQ9Y2J0 694 aaPredicted RBP10.88□□□□□ -0.67
CKAP4-202ENST00000552828 GOLGA6L10A6NI86 522 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 FOXE1O00358 373 aaPredicted RBP10.87□□□□□ -0.67
CKAP4-202ENST00000552828 SH3BGRLO75368 114 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 TRIM3O75382 744 aaPredicted RBP10.87□□□□□ -0.67
CKAP4-202ENST00000552828 EPPINO95925 133 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 CREB1P16220 341 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 DNASE1P24855 282 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 SERPINB3P29508 390 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 GALNSP34059 522 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 TIMP3P35625 211 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 SSR2P43308 183 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 ASCL1P50553 236 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 NEK2P51955 445 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 ARFIP1P53367 373 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 PKNOX1P55347 436 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 RPS13P62277 151 aaKnown RBP10.87□□□□□ -0.67
CKAP4-202ENST00000552828 PPP2R2AP63151 447 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 PLIN5Q00G26 463 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 SLAMF1Q13291 335 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 CASP8Q14790 479 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 CEBPEQ15744 281 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 NTRK2Q16620 822 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 SPRED3Q2MJR0 410 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 FLYWCH1Q4VC44 716 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 LIPMQ5VYY2 423 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 OR4C11Q6IEV9 310 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 LETMD1Q6P1Q0 360 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 GPRIN3Q6ZVF9 776 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 CAMKMTQ7Z624 323 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 GPR180Q86V85 440 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 EXOC3L1Q86VI1 746 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 CDC20BQ86Y33 519 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 C10orf107Q8IVU9 208 aa10.87□□□□□ -0.67
CKAP4-202ENST00000552828 ST13P4Q8IZP2 240 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms