RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, human

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB3IP-216	ENST00000552199	SLC37A2	Q8TED4	501 aa		13.18	□□□□□ -0.3
RAB3IP-216	ENST00000552199	KAT2A	Q92830	837 aa		13.18	□□□□□ -0.3
RAB3IP-216	ENST00000552199	FUZ	Q9BT04	418 aa		13.18	□□□□□ -0.3
RAB3IP-216	ENST00000552199	PHF7	Q9BWX1	381 aa	Predicted RBP	13.18	□□□□□ -0.3
RAB3IP-216	ENST00000552199	HRASLS2	Q9NWW9	162 aa		13.18	□□□□□ -0.3
RAB3IP-216	ENST00000552199	FTSJ1	Q9UET6	329 aa		13.18	□□□□□ -0.3
RAB3IP-216	ENST00000552199	A4GNT	Q9UNA3	340 aa		13.18	□□□□□ -0.3
RAB3IP-216	ENST00000552199	MGAT4B	Q9UQ53	548 aa		13.18	□□□□□ -0.3
RAB3IP-216	ENST00000552199	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199		A0A0J9YY10	115 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	FAM227A	F5H4B4	570 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199		M0R3H8	397 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	DNAJB6	O75190	326 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	EPPIN	O95925	133 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	LGI1	O95970	557 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	ADA	P00813	363 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	CTSE	P14091	401 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	PVR	P15151	417 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	ZNF10	P21506	573 aa	Predicted RBP	13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	NUDT1	P36639	197 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	XK	P51811	444 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	CRISP1	P54107	249 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	MVK	Q03426	396 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	PTGES3	Q15185	160 aa	Known RBP	13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	SEC23B	Q15437	767 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	SYT6	Q5T7P8	510 aa	Predicted RBP	13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	SLC16A12	Q6ZSM3	486 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	AHSA2	Q719I0	299 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	CCDC103	Q8IW40	242 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	LRRC25	Q8N386	305 aa	Predicted RBP	13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	RERG	Q96A58	199 aa	Predicted RBP	13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	GIMAP5	Q96F15	307 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	ACTRT3	Q9BYD9	372 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	UCK2	Q9BZX2	261 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	ANKRA2	Q9H9E1	313 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	EQTN	Q9NQ60	294 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	PRDM9	Q9NQV7	894 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	C2orf42	Q9NWW7	574 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	MS4A12	Q9NXJ0	267 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	NTM	Q9P121	344 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	PSORS1C1	Q9UIG5	152 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	ENPP5	Q9UJA9	477 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	DAPP1	Q9UN19	280 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	SLC9A8	Q9Y2E8	581 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	DSPP	Q9NZW4	1301 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199		A0A1W2PPC4	97 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	ZAR1L	A6NP61	321 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	CHURC1-FNTB	B4DL54	471 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	ALOX12	P18054	663 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	CHM	P24386	653 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	TLX1	P31314	330 aa	Predicted RBP	13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	CCDC81	Q6ZN84	652 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	FAM92B	Q6ZTR7	304 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	RNF44	Q7L0R7	432 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	DNAJC22	Q8N4W6	341 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	GAB3	Q8WWW8	586 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	RSC1A1	Q92681	617 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	KLHDC7B	Q96G42	594 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	ORAI3	Q9BRQ5	295 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	PINK1	Q9BXM7	581 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	LYRM4	Q9HD34	91 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	ACOT13	Q9NPJ3	140 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	FKBP14	Q9NWM8	211 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	IMPAD1	Q9NX62	359 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	GIN1	Q9NXP7	522 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	REV1	Q9UBZ9	1251 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	LIPT1	Q9Y234	373 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	SLC22A7	Q9Y694	548 aa		13.17	□□□□□ -0.3
RAB3IP-216	ENST00000552199	CASC3	O15234	703 aa	Known RBP	13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	ZSCAN9	O15535	394 aa	Predicted RBP	13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	MAN1A2	O60476	641 aa		13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	FADS2	O95864	444 aa	Known RBP	13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	EIF2S1	P05198	315 aa	Known RBP	13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	SIM1	P81133	766 aa	Predicted RBP	13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	PIN1	Q13526	163 aa	Predicted RBP	13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	C1orf61	Q13536	156 aa		13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	TDG	Q13569	410 aa		13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	MANEA	Q5SRI9	462 aa		13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	C6orf132	Q5T0Z8	1188 aa		13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	USP53	Q70EK8	1073 aa		13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	HMGN2P46	Q86SG4	172 aa		13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	OR7G2	Q8NG99	324 aa		13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	MYDGF	Q969H8	173 aa		13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	YIPF6	Q96EC8	236 aa		13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	TRNT1	Q96Q11	434 aa	Known RBP	13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	COPS4	Q9BT78	406 aa		13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	SLC38A1	Q9H2H9	487 aa		13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	CALML5	Q9NZT1	146 aa		13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	DUSP12	Q9UNI6	340 aa		13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199	MRPS2	Q9Y399	296 aa	Known RBP	13.16	□□□□□ -0.3
RAB3IP-216	ENST00000552199		A0A1W2PRQ8	180 aa		13.15	□□□□□ -0.3
RAB3IP-216	ENST00000552199	SH3PXD2B	A1X283	911 aa		13.15	□□□□□ -0.3
RAB3IP-216	ENST00000552199	CLCA1	A8K7I4	914 aa		13.15	□□□□□ -0.3
RAB3IP-216	ENST00000552199	OR10H3	O60404	316 aa		13.15	□□□□□ -0.3
RAB3IP-216	ENST00000552199	BCAS1	O75363	584 aa	Predicted RBP	13.15	□□□□□ -0.3
RAB3IP-216	ENST00000552199	UGT2B17	O75795	530 aa		13.15	□□□□□ -0.3
RAB3IP-216	ENST00000552199	OSM	P13725	252 aa		13.15	□□□□□ -0.3
RAB3IP-216	ENST00000552199	ZNF182	P17025	639 aa	Predicted RBP	13.15	□□□□□ -0.3
RAB3IP-216	ENST00000552199	CTSK	P43235	329 aa		13.15	□□□□□ -0.3

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