RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 WHRNQ9P202 907 aa11.15□□□□□ -0.62
SNRPF-204ENST00000552085 REXO2Q9Y3B8 237 aaKnown RBP11.15□□□□□ -0.62
SNRPF-204ENST00000552085 VWFP04275 2813 aa11.15□□□□□ -0.62
SNRPF-204ENST00000552085 CADP27708 2225 aa11.15□□□□□ -0.63
SNRPF-204ENST00000552085 CDC7O00311 574 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 DYRK3O43781 588 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 STT3AP46977 705 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 TMED10P49755 219 aaKnown RBP11.14□□□□□ -0.63
SNRPF-204ENST00000552085 RGS4P49798 205 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 AP1S2P56377 157 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 BASP1P80723 227 aaKnown RBP11.14□□□□□ -0.63
SNRPF-204ENST00000552085 THOC5Q13769 683 aaKnown RBP11.14□□□□□ -0.63
SNRPF-204ENST00000552085 EBPQ15125 230 aaKnown RBP11.14□□□□□ -0.63
SNRPF-204ENST00000552085 GUSBP1Q15486 140 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 AGAP6Q5VW22 663 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 UGT3A1Q6NUS8 523 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 DRICH1Q6PGQ1 229 aaPredicted RBP11.14□□□□□ -0.63
SNRPF-204ENST00000552085 RNF111Q6ZNA4 994 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 KLHDC8AQ8IYD2 350 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 C7orf57Q8NEG2 295 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 EEF1AKMT1Q8WVE0 214 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 C1orf54Q8WWF1 131 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 SLC5A11Q8WWX8 675 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 FBXL20Q96IG2 436 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 DGAT2Q96PD7 388 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 SERINC2Q96SA4 455 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 AIF1LQ9BQI0 150 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 FANCFQ9NPI8 374 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 SERHLQ9NQF3 203 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 FBXO6Q9NRD1 293 aaPredicted RBP11.14□□□□□ -0.63
SNRPF-204ENST00000552085 PLSCR4Q9NRQ2 329 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 TAS2R10Q9NYW0 307 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 TMEFF2Q9UIK5 374 aaPredicted RBP11.14□□□□□ -0.63
SNRPF-204ENST00000552085 GPR52Q9Y2T5 361 aa11.14□□□□□ -0.63
SNRPF-204ENST00000552085 UQCRHLA0A096LP55 91 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 IQANK1A0A1B0GTG1 560 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 CBR3O75828 277 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 ALDOAP04075 364 aaKnown RBP11.13□□□□□ -0.63
SNRPF-204ENST00000552085 CERS1P27544 350 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 ANP32AP39687 249 aaKnown RBP11.13□□□□□ -0.63
SNRPF-204ENST00000552085 SARNPP82979 210 aaKnown RBP11.13□□□□□ -0.63
SNRPF-204ENST00000552085 SNX1Q13596 522 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 DHX34Q14147 1143 aaKnown RBP11.13□□□□□ -0.63
SNRPF-204ENST00000552085 SETDB1Q15047 1291 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 BCL2A1Q16548 175 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 CCNG2Q16589 344 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 SEL1L2Q5TEA6 688 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 CASC4Q6P4E1 433 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 DGAT2L6Q6ZPD8 337 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 FAM214BQ7L5A3 538 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 DENND6AQ8IWF6 608 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 MYO1HQ8N1T3 1032 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 TSNARE1Q96NA8 513 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 SFXN2Q96NB2 322 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 RBM4Q9BWF3 364 aaKnown RBP11.13□□□□□ -0.63
SNRPF-204ENST00000552085 KRTAP3-3Q9BYR6 98 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 KRTAP3-2Q9BYR7 98 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 METTL7AQ9H8H3 244 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 PELI2Q9HAT8 420 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 NGBQ9NPG2 151 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 SNX15Q9NRS6 342 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 TRMT6Q9UJA5 497 aaKnown RBP11.13□□□□□ -0.63
SNRPF-204ENST00000552085 EXO1Q9UQ84 846 aaKnown RBP11.13□□□□□ -0.63
SNRPF-204ENST00000552085 MAD1L1Q9Y6D9 718 aa11.13□□□□□ -0.63
SNRPF-204ENST00000552085 RYR3Q15413 4870 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 LRIT2A6NDA9 550 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 VWC2LB2RUY7 222 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 TRIM77I1YAP6 450 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 RHOXF2BP0C7M4 288 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 PSMB1P20618 241 aaKnown RBP11.12□□□□□ -0.63
SNRPF-204ENST00000552085 RBMXP38159 391 aaKnown RBP11.12□□□□□ -0.63
SNRPF-204ENST00000552085 SLC1A2P43004 574 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 PLA2G16P53816 162 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 HERVK_113P63132 956 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 ERVK-8P63133 956 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 BSPH1Q075Z2 132 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 CTU2Q2VPK5 515 aaKnown RBP11.12□□□□□ -0.63
SNRPF-204ENST00000552085 C11orf71Q6IPW1 123 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 ZNF793Q6ZN11 406 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 PEG10Q86TG7 708 aaKnown RBP11.12□□□□□ -0.63
SNRPF-204ENST00000552085 ATG4DQ86TL0 474 aaPredicted RBP11.12□□□□□ -0.63
SNRPF-204ENST00000552085 SNX31Q8N9S9 440 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 CALML6Q8TD86 181 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 DOK4Q8TEW6 326 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 PPWD1Q96BP3 646 aaKnown RBP11.12□□□□□ -0.63
SNRPF-204ENST00000552085 C3orf49Q96BT1 292 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 FBXL8Q96CD0 374 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 ERVK-6Q9BXR3 956 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 ARL15Q9NXU5 204 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 ERVK-19Q9WJR5 959 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 BOLA1Q9Y3E2 137 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 SNX8Q9Y5X2 465 aa11.12□□□□□ -0.63
SNRPF-204ENST00000552085 WNK1Q9H4A3 2382 aa11.11□□□□□ -0.63
SNRPF-204ENST00000552085 ZCWPW2A0A1B0GU75 182 aa11.11□□□□□ -0.63
SNRPF-204ENST00000552085 C2orf72A6NCS6 295 aa11.11□□□□□ -0.63
SNRPF-204ENST00000552085 PABPN1LA6NDY0 278 aaKnown RBP11.11□□□□□ -0.63
SNRPF-204ENST00000552085 OR6C76A6NM76 312 aa11.11□□□□□ -0.63
SNRPF-204ENST00000552085 TNFRSF21O75509 655 aa11.11□□□□□ -0.63
SNRPF-204ENST00000552085 HAUS5O94927 633 aa11.11□□□□□ -0.63
SNRPF-204ENST00000552085 GSTM2P28161 218 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms