RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 USE1Q9NZ43 259 aa18.45■□□□□ 0.54
SSH1-209ENST00000551165 RHCGQ9UBD6 479 aa18.45■□□□□ 0.54
SSH1-209ENST00000551165 MAU2Q9Y6X3 613 aa18.45■□□□□ 0.54
SSH1-209ENST00000551165 TMEM221A6NGB7 291 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 M0R296 226 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 H6PDO95479 791 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 FOLR1P15328 257 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 MYF6P23409 242 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 BTG2P78543 158 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 MGAT2Q10469 447 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 EXOSC7Q15024 291 aaKnown RBP18.44■□□□□ 0.54
SSH1-209ENST00000551165 GPAT3Q53EU6 434 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 MFSD12Q6NUT3 480 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 LGI4Q8N135 537 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 GEMIN6Q8WXD5 167 aaKnown RBP18.44■□□□□ 0.54
SSH1-209ENST00000551165 TANKQ92844 425 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 NLGN3Q9NZ94 848 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 NTMQ9P121 344 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 GPC6Q9Y625 555 aaPredicted RBP18.44■□□□□ 0.54
SSH1-209ENST00000551165 CPED1A4D0V7 1026 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 SIGLEC6O43699 453 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 EPPINO95925 133 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 HPRP00739 348 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 ALBP02768 609 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 ATP1B1P05026 303 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 SMIM18P0DKX4 95 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 FPR1P21462 350 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 GPR3P46089 330 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 GANABQ14697 944 aaKnown RBP18.44■□□□□ 0.54
SSH1-209ENST00000551165 NR1D2Q14995 579 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 PERM1Q5SV97 790 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 KRT80Q6KB66 452 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 SLC9A6Q92581 669 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 MUS81Q96NY9 551 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 CD180Q99467 661 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 ACTRT3Q9BYD9 372 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 GAREM1Q9H706 876 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 ADAP2Q9NPF8 381 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 PRDM9Q9NQV7 894 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 LYVE1Q9Y5Y7 322 aa18.44■□□□□ 0.54
SSH1-209ENST00000551165 A6NHS1 94 aa18.43■□□□□ 0.54
SSH1-209ENST00000551165 TMEM150CB9EJG8 249 aa18.43■□□□□ 0.54
SSH1-209ENST00000551165 HYAL3O43820 417 aaPredicted RBP18.43■□□□□ 0.54
SSH1-209ENST00000551165 FCMRO60667 390 aa18.43■□□□□ 0.54
SSH1-209ENST00000551165 SMNDC1O75940 238 aaKnown RBP eCLIP18.43■□□□□ 0.54
SSH1-209ENST00000551165 PPP2R1BP30154 601 aa18.43■□□□□ 0.54
SSH1-209ENST00000551165 KCNJ5P48544 419 aa18.43■□□□□ 0.54
SSH1-209ENST00000551165 CHRNEQ04844 493 aa18.43■□□□□ 0.54
SSH1-209ENST00000551165 KCNAB2Q13303 367 aa18.43■□□□□ 0.54
SSH1-209ENST00000551165 PRICKLE4Q2TBC4 344 aa18.43■□□□□ 0.54
SSH1-209ENST00000551165 USP51Q70EK9 711 aa18.43■□□□□ 0.54
SSH1-209ENST00000551165 PLXDC1Q8IUK5 500 aa18.43■□□□□ 0.54
SSH1-209ENST00000551165 SAMD14Q8IZD0 417 aaPredicted RBP18.43■□□□□ 0.54
SSH1-209ENST00000551165 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.43■□□□□ 0.54
SSH1-209ENST00000551165 CDS1Q92903 461 aa18.43■□□□□ 0.54
SSH1-209ENST00000551165 BATF3Q9NR55 127 aa18.43■□□□□ 0.54
SSH1-209ENST00000551165 THSD1Q9NS62 852 aa18.43■□□□□ 0.54
SSH1-209ENST00000551165 MAT2BQ9NZL9 334 aa18.43■□□□□ 0.54
SSH1-209ENST00000551165 SEC14L3Q9UDX4 400 aa18.43■□□□□ 0.54
SSH1-209ENST00000551165 SUSD2Q9UGT4 822 aa18.43■□□□□ 0.54
SSH1-209ENST00000551165 FFAR1O14842 300 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 PCDHGA12O60330 932 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 NSA2O95478 260 aaKnown RBP18.42■□□□□ 0.54
SSH1-209ENST00000551165 XCR1P46094 333 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 CDH12P55289 794 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 HSD11B2P80365 405 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 FAM53BQ14153 422 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 NDUFA9Q16795 377 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 OR1L3Q8NH93 324 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 VANGL1Q8TAA9 524 aaPredicted RBP18.42■□□□□ 0.54
SSH1-209ENST00000551165 MS4A4EQ96PG1 132 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 SLC38A1Q9H2H9 487 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 FAM118AQ9NWS6 357 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 IFT80Q9P2H3 777 aaPredicted RBP18.42■□□□□ 0.54
SSH1-209ENST00000551165 CLDN16Q9Y5I7 305 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 TMEM247A6NEH6 219 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 ACP2P11117 423 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 CRISP3P54108 245 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 IL1RL1Q01638 556 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 SPIBQ01892 262 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 SLC13A2Q13183 592 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 DUSP5Q16690 384 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 ZNF574Q6ZN55 896 aaPredicted RBP18.42■□□□□ 0.54
SSH1-209ENST00000551165 DTWD2Q8NBA8 298 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 OR4C6Q8NH72 309 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 ZNF607Q96SK3 696 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 CHRNA10Q9GZZ6 450 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 SMOC1Q9H4F8 434 aa18.42■□□□□ 0.54
SSH1-209ENST00000551165 DHCR7Q9UBM7 475 aaKnown RBP18.42■□□□□ 0.54
SSH1-209ENST00000551165 MN1Q10571 1320 aaPredicted RBP18.42■□□□□ 0.54
SSH1-209ENST00000551165 FITM1A5D6W6 292 aa18.41■□□□□ 0.54
SSH1-209ENST00000551165 HRKO00198 91 aa18.41■□□□□ 0.54
SSH1-209ENST00000551165 TNFRSF11BO00300 401 aa18.41■□□□□ 0.54
SSH1-209ENST00000551165 OR2B3O76000 313 aa18.41■□□□□ 0.54
SSH1-209ENST00000551165 RNH1P13489 461 aaKnown RBP18.41■□□□□ 0.54
SSH1-209ENST00000551165 PDX1P52945 283 aa18.41■□□□□ 0.54
SSH1-209ENST00000551165 GPLD1P80108 840 aa18.41■□□□□ 0.54
SSH1-209ENST00000551165 TTLL10Q6ZVT0 673 aa18.41■□□□□ 0.54
SSH1-209ENST00000551165 LSRQ86X29 649 aaPredicted RBP18.41■□□□□ 0.54
SSH1-209ENST00000551165 ADAMTS15Q8TE58 950 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms