RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 TRPC5OSA6NMA1 111 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 G3V3Y1 287 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 SCAMP2O15127 329 aaKnown RBP12.7□□□□□ -0.38
TROAP-213ENST00000550709 VPS4BO75351 444 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 RASAL1O95294 804 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 NADKO95544 446 aaPredicted RBP12.7□□□□□ -0.38
TROAP-213ENST00000550709 LBPP18428 481 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 EPHA3P29320 983 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 MC3RP41968 323 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 GPR85P60893 370 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 HSPB3Q12988 150 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 MAD2L1Q13257 205 aaPredicted RBP12.7□□□□□ -0.38
TROAP-213ENST00000550709 PDE7AQ13946 482 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 CEBPEQ15744 281 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 NXNQ6DKJ4 435 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 OPN5Q6U736 354 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 R3HCC1LQ7Z5L2 792 aaKnown RBP12.7□□□□□ -0.38
TROAP-213ENST00000550709 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.7□□□□□ -0.38
TROAP-213ENST00000550709 TAGAPQ8N103 731 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 TMEM178AQ8NBL3 297 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 FAM13CQ8NE31 585 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 ZNF675Q8TD23 568 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 MIB2Q96AX9 1013 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 SCMH1Q96GD3 660 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 ITPAQ9BY32 194 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 TRIM45Q9H8W5 580 aaPredicted RBP12.7□□□□□ -0.38
TROAP-213ENST00000550709 SLCO1B3Q9NPD5 702 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 TIMMDC1Q9NPL8 285 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 ATP6V1HQ9UI12 483 aa12.7□□□□□ -0.38
TROAP-213ENST00000550709 SLCO1B7G3V0H7 640 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 NME2P1O60361 137 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 LAMP1P11279 417 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 PRPS1L1P21108 318 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 GPX3P22352 226 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 NME2P22392 152 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 GPC1P35052 558 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 RFC3P40938 356 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 EMDP50402 254 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 MANFP55145 182 aaKnown RBP12.69□□□□□ -0.38
TROAP-213ENST00000550709 NME5P56597 212 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 PGS1Q32NB8 556 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 CPTPQ5TA50 214 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 RPUSD3Q6P087 351 aaKnown RBP12.69□□□□□ -0.38
TROAP-213ENST00000550709 FAM47EQ6ZV65 393 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 GPALPP1Q8IXQ4 340 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 PRR22Q8IZ63 422 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 BCORP1Q8N888 145 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 ZNF441Q8N8Z8 693 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 ADIPOR1Q96A54 375 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 ZBED6CLQ96FA7 236 aaPredicted RBP12.69□□□□□ -0.38
TROAP-213ENST00000550709 NXF5Q9H1B4 397 aaKnown RBP12.69□□□□□ -0.38
TROAP-213ENST00000550709 AGPAT4Q9NRZ5 378 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 DDX18Q9NVP1 670 aaKnown RBP12.69□□□□□ -0.38
TROAP-213ENST00000550709 PRODH2Q9UF12 536 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 VPS4AQ9UN37 437 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 CFL2Q9Y281 166 aa12.69□□□□□ -0.38
TROAP-213ENST00000550709 CDK2AP1O14519 115 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 PEX1O43933 1283 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 PLOD3O60568 738 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 TBX19O60806 448 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 DIAPH2O60879 1101 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 BCAS2O75934 225 aaPredicted RBP12.68□□□□□ -0.38
TROAP-213ENST00000550709 RPL3P39023 403 aaKnown RBP12.68□□□□□ -0.38
TROAP-213ENST00000550709 NRG3P56975 720 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 ZNF155Q12901 538 aaPredicted RBP12.68□□□□□ -0.38
TROAP-213ENST00000550709 SMU1Q2TAY7 513 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 ZNF791Q3KP31 576 aaPredicted RBP12.68□□□□□ -0.38
TROAP-213ENST00000550709 SLC9B1Q4ZJI4 515 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 HSP90B2PQ58FF3 399 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 FHL5Q5TD97 284 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 LYPD8Q6UX82 237 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 RTL4Q6ZR62 310 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 LARP4Q71RC2 724 aaKnown RBP eCLIP12.68□□□□□ -0.38
TROAP-213ENST00000550709 SZRD1Q7Z422 152 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 MAVSQ7Z434 540 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 ATCAYQ86WG3 371 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 SULF2Q8IWU5 870 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 SLC15A4Q8N697 577 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 PSD4Q8NDX1 1056 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 ZFP28Q8NHY6 868 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 PIWIL2Q8TC59 973 aaKnown RBP12.68□□□□□ -0.38
TROAP-213ENST00000550709 FAR1Q8WVX9 515 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 CKAP2Q8WWK9 683 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 TP53INP1Q96A56 240 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 ERP27Q96DN0 273 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 MTERF3Q96E29 417 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 SPACA9Q96E40 222 aaPredicted RBP12.68□□□□□ -0.38
TROAP-213ENST00000550709 ELP4Q96EB1 424 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 ZNF764Q96H86 408 aaPredicted RBP12.68□□□□□ -0.38
TROAP-213ENST00000550709 C7orf26Q96N11 449 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 PRPF18Q99633 342 aaKnown RBP12.68□□□□□ -0.38
TROAP-213ENST00000550709 TSPAN10Q9H1Z9 355 aaPredicted RBP12.68□□□□□ -0.38
TROAP-213ENST00000550709 OLAHQ9NV23 265 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 ASIC5Q9NY37 505 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 KLF13Q9Y2Y9 288 aaPredicted RBP12.68□□□□□ -0.38
TROAP-213ENST00000550709 PCDHGB6Q9Y5F9 930 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 USH1CQ9Y6N9 552 aa12.68□□□□□ -0.38
TROAP-213ENST00000550709 RP1L1Q8IWN7 2480 aaPredicted RBP12.68□□□□□ -0.38
TROAP-213ENST00000550709 PRRC2CQ9Y520 2896 aaKnown RBP12.67□□□□□ -0.38
TROAP-213ENST00000550709 A0A0G2JMM0 328 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms