RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 SEC22BO75396 215 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 ERLIN1O75477 346 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 CBX7O95931 251 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 MYZAPP0CAP1 466 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 ETV4P43268 484 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 KCNJ2P63252 427 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 MRPS35P82673 323 aaKnown RBP15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 HSF1Q00613 529 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 C2orf80Q0P641 193 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 NTRK2Q16620 822 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 ZNF628Q5EBL2 1059 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 CMPK2Q5EBM0 449 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 SH2D4BQ5SQS7 431 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 FAM71E1Q6IPT2 247 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 MTFR2Q6P444 385 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 Q6ZPB1 254 aaPredicted RBP15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 RGS9BPQ6ZS82 235 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 FAM9CQ8IZT9 166 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 OR10G3Q8NGC4 313 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 TWIST2Q8WVJ9 160 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 ADIPOR1Q96A54 375 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 CTHRC1Q96CG8 243 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 BBS4Q96RK4 519 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 CCT7Q99832 543 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 ITPAQ9BY32 194 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 TTTY12Q9BZ98 90 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 CNIH4Q9P003 139 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 PLEKHB1Q9UF11 243 aaPredicted RBP15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 DTX4Q9Y2E6 619 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 ZNF835Q9Y2P0 537 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 DNAJC15Q9Y5T4 150 aa15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 CHCHD2Q9Y6H1 151 aaPredicted RBP15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 NCOA6Q14686 2063 aaPredicted RBP15.88■□□□□ 0.13
CHMP1A-208ENST00000550102 A1L4Q6 167 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 TP53I11O14683 189 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 CDC40O60508 579 aaKnown RBP eCLIP15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 ZG16O60844 167 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 GLSO94925 669 aaPredicted RBP15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 FGF4P08620 206 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 LINC00032P0C843 101 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 NTSP30990 170 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 MPIP34949 423 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 SERPINB4P48594 390 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 DNASE1L1P49184 302 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 PPIAP62937 165 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 RPL38P63173 70 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 DUSP8Q13202 625 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 CEBPEQ15744 281 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 NNATQ16517 81 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 PRAMEF20Q5VT98 475 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 LRIG3Q6UXM1 1119 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 TMEM64Q6YI46 380 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 TICAM1Q8IUC6 712 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 SPPL2CQ8IUH8 684 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 CCDC116Q8IYX3 515 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 CLYBLQ8N0X4 340 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 OR52R1Q8NGF1 315 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 OR5M3Q8NGP4 307 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 OR9A2Q8NGT5 310 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 OR2T11Q8NH01 316 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 PPP1R14CQ8TAE6 165 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 AGR3Q8TD06 166 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 PGM2Q96G03 612 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 PKNOX2Q96KN3 472 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 NXF5Q9H1B4 397 aaKnown RBP15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 TUBB1Q9H4B7 451 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 IL1RL2Q9HB29 575 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 PRODH2Q9UF12 536 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 TINAGQ9UJW2 476 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 BOKQ9UMX3 212 aaPredicted RBP15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 TRAF6Q9Y4K3 522 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 NPFFR2Q9Y5X5 522 aa15.87■□□□□ 0.13
CHMP1A-208ENST00000550102 NAV2Q8IVL1 2488 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 CCL21O00585 134 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 PIP5K1BO14986 540 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 LSM1O15116 133 aaKnown RBP15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 ACOX3O15254 700 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 TM9SF1O15321 606 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 BCAS2O75934 225 aaPredicted RBP15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 ABCD3P28288 659 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 SOX18P35713 384 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 PIGAP37287 484 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 KIAA0040Q15053 153 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 C3AR1Q16581 482 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 TRMT12Q53H54 448 aaKnown RBP15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 TBCELQ5QJ74 424 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 MAMDC2Q7Z304 686 aaPredicted RBP15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 EXOC3L1Q86VI1 746 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 NUDCD3Q8IVD9 361 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 CHERPQ8IWX8 916 aaKnown RBP15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 FAM109AQ8N4B1 249 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 KAT2AQ92830 837 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 FCRL1Q96LA6 429 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 STMN4Q9H169 189 aaPredicted RBP15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 ZDHHC11Q9H8X9 412 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 PLSCR2Q9NRY7 297 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 TUBA8Q9NY65 449 aaPredicted RBP15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 TAS2R7Q9NYW3 318 aa15.86■□□□□ 0.13
CHMP1A-208ENST00000550102 TMED5Q9Y3A6 229 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms