RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 BICRALQ6AI39 1079 aa11.75□□□□□ -0.53
PTCH1-218ENST00000548945 TMEM64Q6YI46 380 aa11.75□□□□□ -0.53
PTCH1-218ENST00000548945 GOLGA7Q7Z5G4 137 aa11.75□□□□□ -0.53
PTCH1-218ENST00000548945 SPATA4Q8NEY3 305 aa11.75□□□□□ -0.53
PTCH1-218ENST00000548945 OR4K14Q8NGD5 310 aa11.75□□□□□ -0.53
PTCH1-218ENST00000548945 FBF1Q8TES7 1133 aa11.75□□□□□ -0.53
PTCH1-218ENST00000548945 KCTD4Q8WVF5 259 aa11.75□□□□□ -0.53
PTCH1-218ENST00000548945 WDYHV1Q96HA8 205 aa11.75□□□□□ -0.53
PTCH1-218ENST00000548945 ZFP3Q96NJ6 502 aa11.75□□□□□ -0.53
PTCH1-218ENST00000548945 GNRHR2Q96P88 292 aa11.75□□□□□ -0.53
PTCH1-218ENST00000548945 UGT2B28Q9BY64 529 aa11.75□□□□□ -0.53
PTCH1-218ENST00000548945 OR10A5Q9H207 317 aa11.75□□□□□ -0.53
PTCH1-218ENST00000548945 TEX10Q9NXF1 929 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-218ENST00000548945 JKAMPQ9P055 326 aa11.75□□□□□ -0.53
PTCH1-218ENST00000548945 ADAM29Q9UKF5 820 aa11.75□□□□□ -0.53
PTCH1-218ENST00000548945 CAMK2AQ9UQM7 478 aa11.75□□□□□ -0.53
PTCH1-218ENST00000548945 CFL2Q9Y281 166 aa11.75□□□□□ -0.53
PTCH1-218ENST00000548945 KDM4EB2RXH2 506 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-218ENST00000548945 KLHL2O95198 593 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 CLDN9O95484 217 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 ACTL6AO96019 429 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 C2P06681 752 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 ABCB1P08183 1280 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-218ENST00000548945 RHOXF2BP0C7M4 288 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 CPMP14384 443 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 BMP7P18075 431 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 KRT15P19012 456 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 ABCD3P28288 659 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 PTPN6P29350 595 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 MAGEA4P43358 317 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 XKP51811 444 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 PLTPP55058 493 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 WNT3P56703 355 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 ADAM8P78325 824 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 MRPS25P82663 173 aaKnown RBP11.74□□□□□ -0.53
PTCH1-218ENST00000548945 SNTA1Q13424 505 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 RCAN2Q14206 197 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 TIGD3Q6B0B8 471 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 KLC3Q6P597 504 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 PAGE2Q7Z2X7 111 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 ZPLD1Q8TCW7 415 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 ABTB1Q969K4 478 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-218ENST00000548945 AHSPQ9NZD4 102 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 RPH3AQ9Y2J0 694 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-218ENST00000548945 SLC6A5Q9Y345 797 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 UTP11Q9Y3A2 253 aaKnown RBP11.74□□□□□ -0.53
PTCH1-218ENST00000548945 RNF11Q9Y3C5 154 aa11.74□□□□□ -0.53
PTCH1-218ENST00000548945 A0A1W2PS29 197 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 ACOX3O15254 700 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 GUCY1B2O75343 617 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 PPM1BO75688 479 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 ATE1O95260 518 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 GBAP04062 536 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 CT62P0C5K7 136 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 CPN1P15169 458 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 PORP16435 677 aaPredicted RBP11.73□□□□□ -0.53
PTCH1-218ENST00000548945 S1PR1P21453 382 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 GPX3P22352 226 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 GCKP35557 465 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 NEK2P51955 445 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 IRF9Q00978 393 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 GUCY2DQ02846 1103 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 DEFB113Q30KQ7 82 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 EIPR1Q53HC9 387 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 FBXW10Q5XX13 1052 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 FRG2Q64ET8 278 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 SLC30A6Q6NXT4 461 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 SCIMPQ6UWF3 145 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 NUP54Q7Z3B4 507 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 CCDC25Q86WR0 208 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 VWA5B2Q8N398 1253 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 OR1J4Q8NGS1 313 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 FBXO25Q8TCJ0 367 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 TRPC4APQ8TEL6 797 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 UCN3Q969E3 161 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 GPR78Q96P69 363 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 FRG2BQ96QU4 278 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 UCN2Q96RP3 112 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 TRIB1Q96RU8 372 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 NTMT1Q9BV86 223 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 RAB17Q9H0T7 212 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 NXF5Q9H1B4 397 aaKnown RBP11.73□□□□□ -0.53
PTCH1-218ENST00000548945 EPB41L4BQ9H329 900 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 PLEKHF2Q9H8W4 249 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 TMCO1Q9UM00 188 aa11.73□□□□□ -0.53
PTCH1-218ENST00000548945 A0A096LPK6 155 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 HMX2A2RU54 273 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 LRRC14BA6NHZ5 514 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 GOLGA6L10A6NI86 522 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 EEF1E1-BLOC1S5C9J1V9 151 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 OR7A17O14581 309 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 CTIFO43310 598 aaKnown RBP11.72□□□□□ -0.53
PTCH1-218ENST00000548945 EEF1E1O43324 174 aaKnown RBP11.72□□□□□ -0.53
PTCH1-218ENST00000548945 ATP1B1P05026 303 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 CYP4B1P13584 511 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 NAGLUP54802 743 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 EEF1A1P68104 462 aaKnown RBP11.72□□□□□ -0.53
PTCH1-218ENST00000548945 MAP4K2Q12851 820 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 KEAP1Q14145 624 aa11.72□□□□□ -0.53
PTCH1-218ENST00000548945 TOMM20Q15388 145 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms