RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 STARD4Q96DR4 205 aa11.56□□□□□ -0.56
SCAF11-208ENST00000546534 NAT9Q9BTE0 207 aa11.56□□□□□ -0.56
SCAF11-208ENST00000546534 OR51B5Q9H339 312 aa11.56□□□□□ -0.56
SCAF11-208ENST00000546534 METTL7AQ9H8H3 244 aa11.56□□□□□ -0.56
SCAF11-208ENST00000546534 CNOT10Q9H9A5 744 aaKnown RBP11.56□□□□□ -0.56
SCAF11-208ENST00000546534 SERHLQ9NQF3 203 aa11.56□□□□□ -0.56
SCAF11-208ENST00000546534 ZNF701Q9NV72 531 aaPredicted RBP11.56□□□□□ -0.56
SCAF11-208ENST00000546534 DSCAMO60469 2012 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 FAM95CA0A1B0GW59 222 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 PLOD2O00469 737 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 SOX30O94993 753 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 TGM6O95932 706 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 IFNA2P01563 188 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 ABCB1P08183 1280 aaPredicted RBP11.55□□□□□ -0.56
SCAF11-208ENST00000546534 PCNAP12004 261 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 CHMP24386 653 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 GALNSP34059 522 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 NRG3P56975 720 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 SETDB1Q15047 1291 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 TBCCQ15814 346 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 HP1BP3Q5SSJ5 553 aaPredicted RBP11.55□□□□□ -0.56
SCAF11-208ENST00000546534 DEPDC1Q5TB30 811 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 VWA1Q6PCB0 445 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 CCDC137Q6PK04 289 aaKnown RBP11.55□□□□□ -0.56
SCAF11-208ENST00000546534 ZNF474Q6S9Z5 364 aaPredicted RBP11.55□□□□□ -0.56
SCAF11-208ENST00000546534 C22orf34Q6ZV56 151 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 ZNF550Q7Z398 422 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 ZC3HC1Q86WB0 502 aaKnown RBP11.55□□□□□ -0.56
SCAF11-208ENST00000546534 GRAMD2AQ8IUY3 354 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 RNF175Q8N4F7 328 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 SPATA6LQ8N4H0 392 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 OR14L1PQ8NHC6 308 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 RDH11Q8TC12 318 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 TMEM171Q8WVE6 324 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 UCN3Q969E3 161 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 ADIPOR1Q96A54 375 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 CTHRC1Q96CG8 243 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 CMTM7Q96FZ5 175 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 CFAP36Q96G28 342 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 ZC3HAV1LQ96H79 300 aaKnown RBP11.55□□□□□ -0.56
SCAF11-208ENST00000546534 OPN3Q9H1Y3 402 aaPredicted RBP11.55□□□□□ -0.56
SCAF11-208ENST00000546534 CXorf21Q9HAI6 301 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 PHF11Q9UIL8 331 aa11.55□□□□□ -0.56
SCAF11-208ENST00000546534 RAI1Q7Z5J4 1906 aaPredicted RBP11.54□□□□□ -0.56
SCAF11-208ENST00000546534 A0A1W2PS29 197 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 CCNT2O60583 730 aaKnown RBP11.54□□□□□ -0.56
SCAF11-208ENST00000546534 ICOSLGO75144 302 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 CDH16O75309 829 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 CT62P0C5K7 136 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 SLC35E2BP0CK96 405 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 SLC35E2P0CK97 266 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 ABCD3P28288 659 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 UGT2B10P36537 528 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 BUD31P41223 144 aaPredicted RBP11.54□□□□□ -0.56
SCAF11-208ENST00000546534 LHX2P50458 406 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 ATP5J2P56134 94 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 GFRA1P56159 465 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 WDR4P57081 412 aaKnown RBP11.54□□□□□ -0.56
SCAF11-208ENST00000546534 RPS13P62277 151 aaKnown RBP11.54□□□□□ -0.56
SCAF11-208ENST00000546534 FUT7Q11130 342 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 E2F2Q14209 437 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 KBTBD12Q3ZCT8 623 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 SULT1C3Q6IMI6 304 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 SCIMPQ6UWF3 145 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 BTLAQ7Z6A9 289 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 GPSM1Q86YR5 675 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 LAS2Q8IYD9 372 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 TCAIMQ8N3R3 496 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 ZNF615Q8N8J6 731 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 OR7G3Q8NG95 312 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 RGMAQ96B86 450 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 PGM2Q96G03 612 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 NODALQ96S42 347 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 OR2B2Q9GZK3 357 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 RBSNQ9H1K0 784 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 GALNT9Q9HCQ5 603 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 ADGRE2Q9UHX3 823 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 MAPRE3Q9UPY8 281 aa11.54□□□□□ -0.56
SCAF11-208ENST00000546534 EXO1Q9UQ84 846 aaKnown RBP11.54□□□□□ -0.56
SCAF11-208ENST00000546534 A0A087X1B8 175 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 A0A1W2PR48 441 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 C16orf97H3BN30 126 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 PLPP1O14494 284 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 HCRTR2O43614 444 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 CBR3O75828 277 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 CRHP06850 196 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 POU2F1P14859 743 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 KRT15P19012 456 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 PTGDSP41222 190 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 RAP1GDS1P52306 607 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 CLDN18P56856 261 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 CYP1B1Q16678 543 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 CDKL4Q5MAI5 379 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 C10orf62Q5T681 223 aaPredicted RBP11.53□□□□□ -0.56
SCAF11-208ENST00000546534 ANKRD34AQ69YU3 496 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 MRM1Q6IN84 353 aaKnown RBP11.53□□□□□ -0.56
SCAF11-208ENST00000546534 SLC30A6Q6NXT4 461 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 MED27Q6P2C8 311 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 TMEM81Q6P7N7 255 aa11.53□□□□□ -0.56
SCAF11-208ENST00000546534 HIPK1Q86Z02 1210 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms