RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 OCIAD1Q9NX40 245 aa18.19■□□□□ 0.5
SKP2-208ENST00000546211 NCDNQ9UBB6 729 aa18.19■□□□□ 0.5
SKP2-208ENST00000546211 TGFBR3LH3BV60 316 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 M0QX08 132 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 HYAL3O43820 417 aaPredicted RBP18.18■□□□□ 0.5
SKP2-208ENST00000546211 PDE9AO76083 593 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 AGR2O95994 175 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 CT62P0C5K7 136 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 STT3AP46977 705 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 MGAT2Q10469 447 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 MAP4K2Q12851 820 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 TCF15Q12870 199 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 IL11RAQ14626 422 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 CSRP2Q16527 193 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 ATAD3BQ5T9A4 648 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 PWWP2BQ6NUJ5 590 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 CDC73Q6P1J9 531 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 OR10Q1Q8NGQ4 319 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 LZICQ8WZA0 190 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 RIT1Q92963 219 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 EME1Q96AY2 570 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 CTHRC1Q96CG8 243 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 OTUB1Q96FW1 271 aaPredicted RBP18.18■□□□□ 0.5
SKP2-208ENST00000546211 PTCHD1Q96NR3 888 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 CXorf21Q9HAI6 301 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 MKKSQ9NPJ1 570 aaPredicted RBP18.18■□□□□ 0.5
SKP2-208ENST00000546211 HCN4Q9Y3Q4 1203 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 DTNAQ9Y4J8 743 aa18.18■□□□□ 0.5
SKP2-208ENST00000546211 FAM149AA5PLN7 773 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 COQ9O75208 318 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 DEAF1O75398 565 aaPredicted RBP18.17■□□□□ 0.5
SKP2-208ENST00000546211 PGM3O95394 542 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 OPN1SWP03999 348 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 IFNA16P05015 189 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 SOX18P35713 384 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 MAN2A2P49641 1150 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 CRYBA2P53672 197 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 CRISP3P54108 245 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 SELENOWP63302 87 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 SYPL1Q16563 259 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 MINDY4Q4G0A6 757 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.17■□□□□ 0.5
SKP2-208ENST00000546211 RBM44Q6ZP01 1051 aaKnown RBP18.17■□□□□ 0.5
SKP2-208ENST00000546211 QSOX2Q6ZRP7 698 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 ANKFN1Q8N957 763 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 ICA1LQ8NDH6 482 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 PRSS33Q8NF86 280 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 DOK4Q8TEW6 326 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 TAMM41Q96BW9 452 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 ZNF607Q96SK3 696 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 CDC6Q99741 560 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 DOHHQ9BU89 302 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 BDH2Q9BUT1 245 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 COL25A1Q9BXS0 654 aaPredicted RBP18.17■□□□□ 0.5
SKP2-208ENST00000546211 NECTIN3Q9NQS3 549 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 EXD2Q9NVH0 621 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 LIPT1Q9Y234 373 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 OR2W5A6NFC9 320 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 CLOCKO15516 846 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 LRP3O75074 770 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 TIAF1O95411 115 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 FGF5P12034 268 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 GALNSP34059 522 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 RPS26P11Q5JNZ5 115 aaPredicted RBP18.17■□□□□ 0.5
SKP2-208ENST00000546211 ZNF318Q5VUA4 2279 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 ZCCHC12Q6PEW1 402 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 IZUMO2Q6UXV1 221 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 DGAT2L6Q6ZPD8 337 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 VTCN1Q7Z7D3 282 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 ZDHHC21Q8IVQ6 265 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 BBS10Q8TAM1 723 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 SLC9A6Q92581 669 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 VCXQ9H320 206 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 CALML5Q9NZT1 146 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 AKAP7Q9P0M2 348 aaPredicted RBP18.17■□□□□ 0.5
SKP2-208ENST00000546211 CLDN16Q9Y5I7 305 aa18.17■□□□□ 0.5
SKP2-208ENST00000546211 RALGAPA1Q6GYQ0 2036 aa18.16■□□□□ 0.5
SKP2-208ENST00000546211 POLR1CO15160 346 aaPredicted RBP18.16■□□□□ 0.5
SKP2-208ENST00000546211 CBFA2T3O75081 653 aa18.16■□□□□ 0.5
SKP2-208ENST00000546211 CST1P01037 141 aa18.16■□□□□ 0.5
SKP2-208ENST00000546211 CAPNS1P04632 268 aa18.16■□□□□ 0.5
SKP2-208ENST00000546211 FABP3P05413 133 aa18.16■□□□□ 0.5
SKP2-208ENST00000546211 PDX1P52945 283 aa18.16■□□□□ 0.5
SKP2-208ENST00000546211 ILKQ13418 452 aa18.16■□□□□ 0.5
SKP2-208ENST00000546211 EXOSC7Q15024 291 aaKnown RBP18.16■□□□□ 0.5
SKP2-208ENST00000546211 MAPK11Q15759 364 aa18.16■□□□□ 0.5
SKP2-208ENST00000546211 GPAT3Q53EU6 434 aa18.16■□□□□ 0.5
SKP2-208ENST00000546211 PRAMEF8Q5VWM4 474 aa18.16■□□□□ 0.5
SKP2-208ENST00000546211 PRAMEF7Q5VXH5 474 aa18.16■□□□□ 0.5
SKP2-208ENST00000546211 C16orf62Q7Z3J2 963 aa18.16■□□□□ 0.5
SKP2-208ENST00000546211 KRT73Q86Y46 540 aa18.16■□□□□ 0.5
SKP2-208ENST00000546211 CDRT4Q8N9R6 151 aa18.16■□□□□ 0.5
SKP2-208ENST00000546211 SIMC1Q8NDZ2 872 aa18.16■□□□□ 0.5
SKP2-208ENST00000546211 DNAJC9Q8WXX5 260 aa18.16■□□□□ 0.5
SKP2-208ENST00000546211 VPS50Q96JG6 964 aa18.16■□□□□ 0.5
SKP2-208ENST00000546211 ZNF578Q96N58 590 aaPredicted RBP18.16■□□□□ 0.5
SKP2-208ENST00000546211 ZNF184Q99676 751 aaPredicted RBP18.16■□□□□ 0.5
SKP2-208ENST00000546211 TREX2Q9BQ50 279 aaPredicted RBP18.16■□□□□ 0.5
SKP2-208ENST00000546211 APMAPQ9HDC9 416 aa18.16■□□□□ 0.5
SKP2-208ENST00000546211 IL1RAPQ9NPH3 570 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms