RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 SATB2Q9UPW6 733 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 KLHL20Q9Y2M5 609 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 HIF3AQ9Y2N7 669 aa6.13□□□□□ -1.43
SNHG1-225ENST00000545920 PRAMEF33A0A0G2JMD5 474 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 A0A1W2PQ09 198 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 VWA8A3KMH1 1905 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 FABP12A6NFH5 140 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 ANKRD61A6NGH8 418 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 SGK494L7N484 410 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 CTDSP2O14595 271 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 PCDH17O14917 1159 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 NPC1O15118 1278 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 POLR1CO15160 346 aaPredicted RBP6.12□□□□□ -1.43
SNHG1-225ENST00000545920 RGS5O15539 181 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 HOXC11O43248 304 aaPredicted RBP6.12□□□□□ -1.43
SNHG1-225ENST00000545920 PRODHO43272 600 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 ORC5O43913 435 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 VEGFDO43915 354 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 PRAMEF10O60809 474 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 ADAM11O75078 769 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 GUCY1B2O75343 617 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 ENTPD6O75354 484 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 SLC43A1O75387 559 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 CSO75390 466 aaKnown RBP6.12□□□□□ -1.43
SNHG1-225ENST00000545920 ITGA10O75578 1167 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 MFN2O95140 757 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 C1orf105O95561 183 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 GASTP01350 101 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 C1QBP02746 253 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 HLA-DPB1P04440 258 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 URODP06132 367 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 ACP2P11117 423 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 DRD2P14416 443 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 M6PRP20645 277 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 KELP23276 732 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 ELAVL4P26378 380 aaKnown RBP6.12□□□□□ -1.43
SNHG1-225ENST00000545920 NTF4P34130 210 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 RPS19P39019 145 aaKnown RBP6.12□□□□□ -1.43
SNHG1-225ENST00000545920 NNMTP40261 264 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 IL12RB1P42701 662 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 RFX2P48378 723 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 NUDT6P53370 316 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 EFNB1P98172 346 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 CRHR2Q13324 411 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 TNK1Q13470 666 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 DDX39BQ13838 428 aaKnown RBP6.12□□□□□ -1.43
SNHG1-225ENST00000545920 SLBPQ14493 270 aaKnown RBP eCLIP6.12□□□□□ -1.43
SNHG1-225ENST00000545920 SF3A2Q15428 464 aaKnown RBP6.12□□□□□ -1.43
SNHG1-225ENST00000545920 TRAM1Q15629 374 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 SLC5A12Q1EHB4 618 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 TBRG1Q3YBR2 411 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 MINDY4Q4G0A6 757 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 ZNF658BQ4V348 819 aaPredicted RBP6.12□□□□□ -1.43
SNHG1-225ENST00000545920 ZNF628Q5EBL2 1059 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.12□□□□□ -1.43
SNHG1-225ENST00000545920 ZBTB37Q5TC79 503 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 TRIQKQ629K1 86 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 PLET1Q6UQ28 207 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 FAM131AQ6UXB0 335 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 ANGPTL8Q6UXH0 198 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 SLC36A4Q6YBV0 504 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 ZNF730Q6ZMV8 503 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 ZNF782Q6ZMW2 699 aaPredicted RBP6.12□□□□□ -1.43
SNHG1-225ENST00000545920 QSOX2Q6ZRP7 698 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 CREB3L2Q70SY1 520 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 TECPR1Q7Z6L1 1165 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 TMEM150AQ86TG1 271 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 SNX29P2Q8IUI4 249 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 VRK3Q8IV63 474 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 MRPL41Q8IXM3 137 aaKnown RBP6.12□□□□□ -1.43
SNHG1-225ENST00000545920 SLC34A3Q8N130 599 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 C19orf18Q8NEA5 215 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 DBF4BQ8NFT6 615 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 TTLQ8NG68 377 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 OR9Q2Q8NGE9 314 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 CDC26Q8NHZ8 85 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 TMEM163Q8TC26 289 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 ENKURQ8TC29 256 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 WFDC5Q8TCV5 224 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 SFXN5Q8TD22 340 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 GPR151Q8TDV0 419 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 MAL2Q969L2 176 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 TMEM169Q96HH4 297 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 MED30Q96HR3 178 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 B3GALT6Q96L58 329 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 ZNF558Q96NG5 402 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 SLC38A2Q96QD8 506 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 OR4K3Q96R72 315 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 OR5M11Q96RB7 305 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 UBL7Q96S82 380 aaPredicted RBP6.12□□□□□ -1.43
SNHG1-225ENST00000545920 PKP4Q99569 1192 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 GDF15Q99988 308 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 SOSTQ9BQB4 213 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 CNPPD1Q9BV87 410 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 TSSK6Q9BXA6 273 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 BBS2Q9BXC9 721 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 MARCH7Q9H992 704 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 RMI1Q9H9A7 625 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 FOLH1BQ9HBA9 442 aa6.12□□□□□ -1.43
SNHG1-225ENST00000545920 EXOSC4Q9NPD3 245 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms