RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 H0YJX3 145 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 IMPDH1P20839 514 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 SHC2P98077 582 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 PON3Q15166 354 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 C5orf22Q49AR2 442 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 TNFAIP8L3Q5GJ75 292 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 MPP7Q5T2T1 576 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 MZT2BQ6NZ67 158 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 KDELC1Q6UW63 502 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 LARP4Q71RC2 724 aaKnown RBP eCLIP8.18□□□□□ -1.1
CLIP1-218ENST00000545889 TMEM150AQ86TG1 271 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 OR8H3Q8N146 312 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 ADAD1Q96M93 576 aaKnown RBP8.18□□□□□ -1.1
CLIP1-218ENST00000545889 RPP25Q9BUL9 199 aaKnown RBP8.18□□□□□ -1.1
CLIP1-218ENST00000545889 KCNK12Q9HB15 430 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 DYNLRB1Q9NP97 96 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 MCTS1Q9ULC4 181 aaKnown RBP8.18□□□□□ -1.1
CLIP1-218ENST00000545889 PCDHGA10Q9Y5H3 936 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 ARID1BQ8NFD5 2236 aaPredicted RBP8.18□□□□□ -1.1
CLIP1-218ENST00000545889 IGLV3-10A0A075B6K4 115 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 CDC14CA4D256 554 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 TRIM64BA6NI03 449 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 MT-ND1P03886 318 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 ZNF3P17036 446 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 MATN1P21941 496 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 CDK6Q00534 326 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 ZNF33BQ06732 778 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 DLX2Q07687 328 aaPredicted RBP8.18□□□□□ -1.1
CLIP1-218ENST00000545889 ST3GAL3Q11203 375 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 SERTAD2Q14140 314 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 GBX1Q14549 363 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 EXOC3L2Q2M3D2 409 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 SPPL2CQ8IUH8 684 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 SPARTQ8N0X7 666 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 PHTF2Q8N3S3 785 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 FTMTQ8N4E7 242 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 OR4F6Q8NGB9 312 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 OR9K2Q8NGE7 335 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 EDEM2Q9BV94 578 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 GRHPRQ9UBQ7 328 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 TMPRSS11EQ9UL52 423 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 DHRS7Q9Y394 339 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 A0A1W2PPL8 197 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 IGLV3-27P01718 113 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 EBLN1P0CF75 366 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 CCL11P51671 97 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 OLR1P78380 273 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 ZNF763Q0D2J5 394 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 SCRN3Q0VDG4 424 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 ALG10Q5BKT4 473 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 TMEM201Q5SNT2 666 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 PRPF38BQ5VTL8 546 aaKnown RBP8.18□□□□□ -1.1
CLIP1-218ENST00000545889 PSAPL1Q6NUJ1 521 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 QSOX2Q6ZRP7 698 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 SPATC1Q76KD6 591 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 MDGA1Q8NFP4 955 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 OR2L8Q8NGY9 312 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.18□□□□□ -1.15e-8■■■■■ 43.8
CLIP1-218ENST00000545889 FAM174AQ8TBP5 190 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 THEM6Q8WUY1 208 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 PRRX2Q99811 253 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 C1orf21Q9H246 121 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 FZD4Q9ULV1 537 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 DOCK6Q96HP0 2047 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 OR6C70A6NIJ9 312 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 SAGE2PA6NJ88 616 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 SLC9B1P1A6NJY1 282 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 FTCDNL1E5RQL4 147 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 OPN1SWP03999 348 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 RPLP0P05388 317 aaKnown RBP8.18□□□□□ -1.1
CLIP1-218ENST00000545889 ICAM2P13598 275 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 ZNF35P13682 527 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 HMGCLP35914 325 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 ZNF77Q15935 545 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 TMEM44Q2T9K0 475 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 ZDHHC21Q8IVQ6 265 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 ZZZ3Q8IYH5 903 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 ZNF420Q8TAQ5 688 aaPredicted RBP8.18□□□□□ -1.1
CLIP1-218ENST00000545889 DOK4Q8TEW6 326 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 NANOS1Q8WY41 292 aaKnown RBP8.18□□□□□ -1.1
CLIP1-218ENST00000545889 FGF14Q92915 247 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 ZNF707Q96C28 371 aaPredicted RBP8.18□□□□□ -1.1
CLIP1-218ENST00000545889 DNAJA3Q96EY1 480 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 FBXL20Q96IG2 436 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 IFT46Q9NQC8 304 aa8.18□□□□□ -1.1
CLIP1-218ENST00000545889 INTS6Q9UL03 887 aaKnown RBP8.18□□□□□ -1.1
CLIP1-218ENST00000545889 A0A1B0GVI7 797 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 GJE1A6NN92 205 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 SOBPA7XYQ1 873 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 CXCR6O00574 342 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 SIGLEC6O43699 453 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 AP1G1O43747 822 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 SULT1C4O75897 302 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 KDM4BO94953 1096 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 SOX30O94993 753 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 TPOP07202 933 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 ADORA3P0DMS8 318 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 ALDH3A2P51648 485 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 OR12D2P58182 307 aa8.17□□□□□ -1.1
CLIP1-218ENST00000545889 SNRPD2P62316 118 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms