RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 ZNF793Q6ZN11 406 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 TRIM69Q86WT6 500 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 NUDT13Q86X67 352 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 LINC01555Q8NAE3 123 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 KLK6Q92876 244 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 TP53INP1Q96A56 240 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 ZG16BQ96DA0 208 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 C16orf58Q96GQ5 468 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 TOX2Q96NM4 488 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 BEX2Q9BXY8 128 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 PLEKHB1Q9UF11 243 aaPredicted RBP14.91□□□□□ -0.02
LDLR-204ENST00000545707 A0A1W2PPV9 198 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 PGRMC2O15173 223 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 FRKP42685 505 aaPredicted RBP14.91□□□□□ -0.02
LDLR-204ENST00000545707 CLCNKAP51800 687 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 RACK1P63244 317 aaKnown RBP14.91□□□□□ -0.02
LDLR-204ENST00000545707 HOXC5Q00444 222 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 DUSP2Q05923 314 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 GDPGP1Q6ZNW5 385 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 FAM26EQ8N5C1 309 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 SLC25A46Q96AG3 418 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 RGMAQ96B86 450 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 DIRAS2Q96HU8 199 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 AMDHD1Q96NU7 426 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 MENTQ9BUN1 341 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 POLDIP3Q9BY77 421 aaKnown RBP14.91□□□□□ -0.02
LDLR-204ENST00000545707 CNIH4Q9P003 139 aa14.91□□□□□ -0.02
LDLR-204ENST00000545707 TESQ9UGI8 421 aaKnown RBP14.91□□□□□ -0.02
LDLR-204ENST00000545707 A0A1W2PRQ8 180 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 KIAA0355O15063 1070 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 RAB36O95755 333 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 CH25HO95992 272 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 TSPAN19P0C672 248 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 DDX6P26196 483 aaKnown RBP eCLIP14.9□□□□□ -0.022e-8■■□□□ 14
LDLR-204ENST00000545707 SSR2P43308 183 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 DBPQ10586 325 aaPredicted RBP14.9□□□□□ -0.02
LDLR-204ENST00000545707 FUT5Q11128 374 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 FAM92BQ6ZTR7 304 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 ABI3BPQ7Z7G0 1075 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 RAB43Q86YS6 212 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 CCDC116Q8IYX3 515 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 MRPL43Q8N983 215 aaKnown RBP14.9□□□□□ -0.02
LDLR-204ENST00000545707 MORN4Q8NDC4 146 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 OR5K2Q8NHB8 316 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 CREB3L4Q8TEY5 395 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 CHAC2Q8WUX2 184 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 OR8D1Q8WZ84 308 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 ST6GAL2Q96JF0 529 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 MOV10Q9HCE1 1003 aaKnown RBP14.9□□□□□ -0.02
LDLR-204ENST00000545707 DIMT1Q9UNQ2 313 aaKnown RBP14.9□□□□□ -0.02
LDLR-204ENST00000545707 PCDHGB2Q9Y5G2 931 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 MEIOCA2RUB1 952 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 FABP12A6NFH5 140 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 C4orf51C9J302 202 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 FAM47E-STBD1D6RA91 191 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 SCAMP1O15126 338 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 VEGFDO43915 354 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 SOX18P35713 384 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 DPTQ07507 201 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 HNRNPA1L2Q32P51 320 aaKnown RBP14.9□□□□□ -0.02
LDLR-204ENST00000545707 CRTC2Q53ET0 693 aaPredicted RBP14.9□□□□□ -0.02
LDLR-204ENST00000545707 LHFPL3Q86UP9 236 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 PHOX2BQ99453 314 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 TTYH2Q9BSA4 534 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 TRMT61BQ9BVS5 477 aaKnown RBP14.9□□□□□ -0.02
LDLR-204ENST00000545707 MALT1Q9UDY8 824 aa14.9□□□□□ -0.02
LDLR-204ENST00000545707 IGKV1-8A0A0C4DH67 115 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 TMCC2O75069 709 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 HMGN2P05204 90 aaKnown RBP14.89□□□□□ -0.03
LDLR-204ENST00000545707 CLTBP09497 229 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 CSF3P09919 207 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 GAS1P54826 345 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 HYAL2Q12891 473 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 TBRG1Q3YBR2 411 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 GLYR1Q49A26 553 aaPredicted RBP14.89□□□□□ -0.03
LDLR-204ENST00000545707 GPAT3Q53EU6 434 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 C1QTNF12Q5T7M4 302 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 OR4C11Q6IEV9 310 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 PRICKLE2Q7Z3G6 844 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 LAPTM4BQ86VI4 370 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 OR8D4Q8NGM9 314 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 TRIM43Q96BQ3 446 aaPredicted RBP14.89□□□□□ -0.03
LDLR-204ENST00000545707 RNFT2Q96EX2 444 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 DCLRE1CQ96SD1 692 aaKnown RBP14.89□□□□□ -0.03
LDLR-204ENST00000545707 C11orf54Q9H0W9 315 aaPredicted RBP14.89□□□□□ -0.03
LDLR-204ENST00000545707 OSGEPL1Q9H4B0 414 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 PELI2Q9HAT8 420 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 EQTNQ9NQ60 294 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 WASH6PQ9NQA3 447 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 IL20RAQ9UHF4 553 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 GPR55Q9Y2T6 319 aaPredicted RBP14.89□□□□□ -0.03
LDLR-204ENST00000545707 OR1A2Q9Y585 309 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 IRAK3Q9Y616 596 aa14.89□□□□□ -0.03
LDLR-204ENST00000545707 A0A087WUU8 490 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 IGLON5A6NGN9 336 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 CXCR2P25025 360 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 SMIM11AP58511 58 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 CSNK1G2P78368 415 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 CDK5Q00535 292 aa14.88□□□□□ -0.03
LDLR-204ENST00000545707 REEP5Q00765 189 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms