RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 TRIM45Q9H8W5 580 aaPredicted RBP6.62□□□□□ -1.35
SPPL3-209ENST00000545209 CLK4Q9HAZ1 481 aaKnown RBP6.62□□□□□ -1.35
SPPL3-209ENST00000545209 CACYBPQ9HB71 228 aaKnown RBP6.62□□□□□ -1.35
SPPL3-209ENST00000545209 THSD1Q9NS62 852 aa6.62□□□□□ -1.35
SPPL3-209ENST00000545209 EXD2Q9NVH0 621 aa6.62□□□□□ -1.35
SPPL3-209ENST00000545209 CALML5Q9NZT1 146 aa6.62□□□□□ -1.35
SPPL3-209ENST00000545209 CES1P1Q9UKY3 287 aa6.62□□□□□ -1.35
SPPL3-209ENST00000545209 HIF3AQ9Y2N7 669 aa6.62□□□□□ -1.35
SPPL3-209ENST00000545209 PCDHGB3Q9Y5G1 929 aa6.62□□□□□ -1.35
SPPL3-209ENST00000545209 SNX11Q9Y5W9 270 aa6.62□□□□□ -1.35
SPPL3-209ENST00000545209 SLC22A7Q9Y694 548 aa6.62□□□□□ -1.35
SPPL3-209ENST00000545209 KNL1Q8NG31 2342 aa6.62□□□□□ -1.35
SPPL3-209ENST00000545209 GON4LQ3T8J9 2241 aa6.62□□□□□ -1.35
SPPL3-209ENST00000545209 SNRNP200O75643 2136 aaKnown RBP6.62□□□□□ -1.35
SPPL3-209ENST00000545209 LOC105369274A0A096LPK9 316 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 CCDC163A0A0D9SF12 145 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 LOC102723532A0A0G2JNH3 316 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 H3BNH8 94 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 K7ESF4 209 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 HMGN4O00479 90 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 SRPX2O60687 465 aaPredicted RBP6.61□□□□□ -1.35
SPPL3-209ENST00000545209 PRKRAO75569 313 aaKnown RBP6.61□□□□□ -1.35
SPPL3-209ENST00000545209 GCM2O75603 506 aaPredicted RBP6.61□□□□□ -1.35
SPPL3-209ENST00000545209 SLITRK5O94991 958 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 PGM3O95394 542 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 AGR2O95994 175 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 IFNW1P05000 195 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 DCNP07585 359 aaKnown RBP6.61□□□□□ -1.35
SPPL3-209ENST00000545209 CTSBP07858 339 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 TFPTP0C1Z6 253 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 C8orf89P0DMQ9 161 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 OR12D1P0DN82 309 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 ITGAMP11215 1152 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 ST6GAL1P15907 406 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 MATN1P21941 496 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 BCKDHBP21953 392 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 HOXA6P31267 233 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 RPL5P46777 297 aaKnown RBP6.61□□□□□ -1.35
SPPL3-209ENST00000545209 LSSP48449 732 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 CSNK1EP49674 416 aaKnown RBP6.61□□□□□ -1.35
SPPL3-209ENST00000545209 XKP51811 444 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 MAPK10P53779 464 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 CRISP3P54108 245 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 PRKAG1P54619 331 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 LIM2P55344 173 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 ADARB1P78563 741 aaKnown RBP6.61□□□□□ -1.35
SPPL3-209ENST00000545209 HPCAP84074 193 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 IL18R1Q13478 541 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 CEBPEQ15744 281 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 ZIK1Q3SY52 487 aaPredicted RBP6.61□□□□□ -1.35
SPPL3-209ENST00000545209 C14orf28Q4W4Y0 310 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 ATAD3BQ5T9A4 648 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 PRAMEF8Q5VWM4 474 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 PRAMEF7Q5VXH5 474 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 FRMPD2BQ6IN97 320 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 TMEM107Q6UX40 140 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 C11orf74Q86VG3 221 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 CYP4Z1Q86W10 505 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 MCATQ8IVS2 390 aaKnown RBP6.61□□□□□ -1.35
SPPL3-209ENST00000545209 SFTPA2Q8IWL1 248 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 TMEFF1Q8IYR6 380 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 C8orf59Q8N0T1 100 aaPredicted RBP6.61□□□□□ -1.35
SPPL3-209ENST00000545209 OR4N4Q8N0Y3 316 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 ATG16L2Q8NAA4 619 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 SETD9Q8NE22 299 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 TSPAN14Q8NG11 270 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 MAFAQ8NHW3 353 aaPredicted RBP6.61□□□□□ -1.35
SPPL3-209ENST00000545209 SUN3Q8TAQ9 357 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 MIPOL1Q8TD10 442 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 ADAMTS18Q8TE60 1221 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 SLC38A5Q8WUX1 472 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 XAGE5Q8WWM1 108 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 TANKQ92844 425 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 RAB8BQ92930 207 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 ZDHHC12Q96GR4 267 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 TMEM19Q96HH6 336 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 FBXL20Q96IG2 436 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 MAGED4Q96JG8 741 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 C7orf34Q96L11 122 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 MS4A4EQ96PG1 132 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 TRAPPC9Q96Q05 1148 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 CD180Q99467 661 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 PIP5K1AQ99755 562 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 NPLQ9BXD5 320 aaPredicted RBP6.61□□□□□ -1.35
SPPL3-209ENST00000545209 OR51I1Q9H343 314 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 EPB41L1Q9H4G0 881 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 SYNPO2LQ9H987 977 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 SMURF2Q9HAU4 748 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 ANKHQ9HCJ1 492 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 DDX18Q9NVP1 670 aaKnown RBP6.61□□□□□ -1.35
SPPL3-209ENST00000545209 IRAK4Q9NWZ3 460 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 NDUFAF4Q9P032 175 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 NDUFA13Q9P0J0 144 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 PDP1Q9P0J1 537 aaPredicted RBP6.61□□□□□ -1.35
SPPL3-209ENST00000545209 KCMF1Q9P0J7 381 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 THEGQ9P2T0 379 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 EPHA6Q9UF33 1036 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 DAPP1Q9UN19 280 aa6.61□□□□□ -1.35
SPPL3-209ENST00000545209 CLCA2Q9UQC9 943 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms