RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 MFSD12Q6NUT3 480 aa28.45■■■□□ 2.14
CCM2-219ENST00000544363 GALNT10Q86SR1 603 aa28.45■■■□□ 2.14
CCM2-219ENST00000544363 GALNT12Q8IXK2 581 aa28.45■■■□□ 2.14
CCM2-219ENST00000544363 LGI4Q8N135 537 aa28.45■■■□□ 2.14
CCM2-219ENST00000544363 LILRA2Q8N149 483 aa28.45■■■□□ 2.14
CCM2-219ENST00000544363 FAM86B1Q8N7N1 296 aa28.45■■■□□ 2.14
CCM2-219ENST00000544363 SIMC1Q8NDZ2 872 aa28.45■■■□□ 2.14
CCM2-219ENST00000544363 RIT1Q92963 219 aa28.45■■■□□ 2.14
CCM2-219ENST00000544363 CMKLR1Q99788 373 aa28.45■■■□□ 2.14
CCM2-219ENST00000544363 PKP2Q99959 881 aa28.45■■■□□ 2.14
CCM2-219ENST00000544363 P2RX2Q9UBL9 471 aa28.45■■■□□ 2.14
CCM2-219ENST00000544363 RPS6KA6Q9UK32 745 aa28.45■■■□□ 2.14
CCM2-219ENST00000544363 PCDHGA1Q9Y5H4 931 aa28.45■■■□□ 2.14
CCM2-219ENST00000544363 HNRNPRO43390 633 aaKnown RBP28.44■■■□□ 2.14
CCM2-219ENST00000544363 ASNA1O43681 348 aa28.44■■■□□ 2.14
CCM2-219ENST00000544363 ONECUT2O95948 504 aa28.44■■■□□ 2.14
CCM2-219ENST00000544363 AQP1P29972 269 aa28.44■■■□□ 2.14
CCM2-219ENST00000544363 DCDP81605 110 aaKnown RBP28.44■■■□□ 2.14
CCM2-219ENST00000544363 MINDY4Q4G0A6 757 aa28.44■■■□□ 2.14
CCM2-219ENST00000544363 MFSD4BQ5TF39 518 aa28.44■■■□□ 2.14
CCM2-219ENST00000544363 STPG1Q5TH74 334 aa28.44■■■□□ 2.14
CCM2-219ENST00000544363 ZNF385CQ66K41 422 aaPredicted RBP28.44■■■□□ 2.14
CCM2-219ENST00000544363 VWA5B2Q8N398 1253 aa28.44■■■□□ 2.14
CCM2-219ENST00000544363 OR7D2Q96RA2 312 aa28.44■■■□□ 2.14
CCM2-219ENST00000544363 TGIF2Q9GZN2 237 aa28.44■■■□□ 2.14
CCM2-219ENST00000544363 RIMS3Q9UJD0 308 aa28.44■■■□□ 2.14
CCM2-219ENST00000544363 TMEM247A6NEH6 219 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 B4E171 279 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 C5orf58C9J3I9 102 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 TMX2-CTNND1H3BSU7 103 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 BCHEP06276 602 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 GALNSP34059 522 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 TSPAN7P41732 249 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 PCBP3P57721 371 aaKnown RBP28.43■■■□□ 2.14
CCM2-219ENST00000544363 RHAGQ02094 409 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 CHRNB3Q05901 458 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 CDCP2Q5VXM1 449 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 CDC73Q6P1J9 531 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 LRRC74BQ6ZQY2 392 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 CBLL1Q75N03 491 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 EIF3MQ7L2H7 374 aaKnown RBP28.43■■■□□ 2.14
CCM2-219ENST00000544363 METTL25Q8N6Q8 603 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 C7orf57Q8NEG2 295 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 NRG4Q8WWG1 115 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 TMEM19Q96HH6 336 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 PYURFQ96I23 114 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 RNF145Q96MT1 663 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 STRADBQ9C0K7 418 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 ZNF639Q9UID6 485 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 NUP210LQ5VU65 1888 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 IGLV3-12A0A075B6K2 115 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 IGKV3D-11A0A0A0MRZ8 115 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 TIPRLO75663 272 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 RAP2AP10114 183 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 RORAP35398 523 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 CRYBA2P53672 197 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 MAPK11Q15759 364 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 SLC44A2Q8IWA5 706 aaPredicted RBP28.43■■■□□ 2.14
CCM2-219ENST00000544363 LRTOMTQ8WZ04 291 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 OTUB1Q96FW1 271 aaPredicted RBP28.43■■■□□ 2.14
CCM2-219ENST00000544363 ADAP2Q9NPF8 381 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 TOR4AQ9NXH8 423 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 CTSFQ9UBX1 484 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 ZNF451Q9Y4E5 1061 aa28.43■■■□□ 2.14
CCM2-219ENST00000544363 PRAMEF27A3QJZ7 478 aa28.42■■■□□ 2.14
CCM2-219ENST00000544363 CPNE3O75131 537 aaKnown RBP28.42■■■□□ 2.14
CCM2-219ENST00000544363 ZNF682O95780 498 aa28.42■■■□□ 2.14
CCM2-219ENST00000544363 IFNA16P05015 189 aa28.42■■■□□ 2.14
CCM2-219ENST00000544363 S1PR1P21453 382 aa28.42■■■□□ 2.14
CCM2-219ENST00000544363 CLCN2P51788 898 aa28.42■■■□□ 2.14
CCM2-219ENST00000544363 EXOSC7Q15024 291 aaKnown RBP28.42■■■□□ 2.14
CCM2-219ENST00000544363 CRB2Q5IJ48 1285 aa28.42■■■□□ 2.14
CCM2-219ENST00000544363 SLC47A1Q96FL8 570 aa28.42■■■□□ 2.14
CCM2-219ENST00000544363 CHID1Q9BWS9 393 aa28.42■■■□□ 2.14
CCM2-219ENST00000544363 MAGIXQ9H6Y5 334 aa28.42■■■□□ 2.14
CCM2-219ENST00000544363 SLC39A1Q9NY26 324 aa28.42■■■□□ 2.14
CCM2-219ENST00000544363 DUXAA6NLW8 204 aa28.41■■■□□ 2.14
CCM2-219ENST00000544363 SLC28A2O43868 658 aa28.41■■■□□ 2.14
CCM2-219ENST00000544363 NME6O75414 186 aaPredicted RBP28.41■■■□□ 2.14
CCM2-219ENST00000544363 CBX7O95931 251 aa28.41■■■□□ 2.14
CCM2-219ENST00000544363 ELOAQ14241 798 aaKnown RBP28.41■■■□□ 2.14
CCM2-219ENST00000544363 TRIP6Q15654 476 aaKnown RBP28.41■■■□□ 2.14
CCM2-219ENST00000544363 NKG7Q16617 165 aa28.41■■■□□ 2.14
CCM2-219ENST00000544363 ERMP1Q7Z2K6 904 aa28.41■■■□□ 2.14
CCM2-219ENST00000544363 PATL1Q86TB9 770 aaKnown RBP28.41■■■□□ 2.14
CCM2-219ENST00000544363 TMEM102Q8N9M5 508 aaPredicted RBP28.41■■■□□ 2.14
CCM2-219ENST00000544363 ADAMTS15Q8TE58 950 aa28.41■■■□□ 2.14
CCM2-219ENST00000544363 NR2F1P10589 423 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 HOXB6P17509 224 aaKnown RBP28.4■■■□□ 2.14
CCM2-219ENST00000544363 OCA2Q04671 838 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 SYPL1Q16563 259 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 ISXQ2M1V0 245 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 CYBRD1Q53TN4 286 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 ZCCHC12Q6PEW1 402 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 STT3BQ8TCJ2 826 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 TSLPQ969D9 159 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 ZNF578Q96N58 590 aaPredicted RBP28.4■■■□□ 2.14
CCM2-219ENST00000544363 ADPRHL2Q9NX46 363 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 LOXL2Q9Y4K0 774 aa28.4■■■□□ 2.14
CCM2-219ENST00000544363 KCNE3Q9Y6H6 103 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms